Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 RNU6-212P-201ENST00000362642 104 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 RNU4-50P-201ENST00000364361 141 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 Y_RNA.526-201ENST00000384572 110 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 Y_RNA.562-201ENST00000384695 113 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 MIR628-201ENST00000385229 95 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 RNU6-821P-201ENST00000390995 107 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC016739.1-201ENST00000405359 345 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 CYCSP10-201ENST00000417973 294 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 RPS15AP6-201ENST00000420703 385 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC099336.2-201ENST00000422457 254 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 RPL7P2-201ENST00000427639 268 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC008264.1-201ENST00000447612 367 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC099560.2-201ENST00000457554 255 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 snoU109.4-201ENST00000458953 143 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 RPL21P41-201ENST00000459863 264 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC093852.1-201ENST00000503587 266 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 RNU6-840P-201ENST00000517275 65 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 AP003733.2-201ENST00000529409 171 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 TOMM20P1-201ENST00000534518 427 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 RPS29P30-201ENST00000600975 111 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC174048.1-201ENST00000603389 144 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 NANOGP3-201ENST00000605855 286 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 AL139099.4-201ENST00000614802 114 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 SNORD39.4-201ENST00000620099 78 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AL136228.1-201ENST00000622221 319 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 AL359893.1-201ENST00000447628 1580 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 AC116667.1-201ENST00000604855 2072 ntBASIC5.41□□□□□ -1.54
GPC6Q9Y625 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC6Q9Y625 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GPC6Q9Y625 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GPC6Q9Y625 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GPC6Q9Y625 RN7SKP185-201ENST00000362813 326 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RNU6-774P-201ENST00000363238 107 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RN7SKP162-201ENST00000363605 345 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RNA5SP433-201ENST00000364491 114 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RNU1-74P-201ENST00000384108 171 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RNU6-933P-201ENST00000384424 107 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 HMGB1P20-201ENST00000402555 677 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RNU4-78P-201ENST00000410940 126 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 GPS2P1-201ENST00000411761 986 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 CTSL3P-202ENST00000412179 788 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RAC1P3-201ENST00000416129 580 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 BX842559.1-201ENST00000419615 532 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 AL590135.1-201ENST00000422215 156 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC092423.1-201ENST00000430165 186 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC004866.2-201ENST00000438285 481 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC023141.8-201ENST00000442554 208 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 MRPL48P1-201ENST00000445390 636 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 IGHV5-78-201ENST00000450948 295 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 GEMIN2P1-201ENST00000454246 752 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RNU6-953P-201ENST00000459154 107 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC110792.1-201ENST00000491826 472 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RN7SL591P-201ENST00000496150 292 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AL390726.5-202ENST00000564800 256 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 MIR5692A1-201ENST00000580523 69 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 HMGB2P1-201ENST00000591146 634 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 VN1R91P-201ENST00000594377 169 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 AL390123.1-201ENST00000603216 237 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 MIR6793-201ENST00000612376 63 ntBASIC5.4□□□□□ -1.54
GPC6Q9Y625 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GPC6Q9Y625 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GPC6Q9Y625 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms