Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 OR1S2-201ENST00000302592 978 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-637P-201ENST00000384050 107 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-754P-201ENST00000391166 107 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 RPL23AP26-201ENST00000412728 464 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AL137014.1-201ENST00000420490 1226 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 GPR143P-201ENST00000434155 205 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AL132765.1-201ENST00000434165 553 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AL662791.1-201ENST00000441992 928 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 RPL21P89-201ENST00000444021 467 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC010655.1-201ENST00000449336 292 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 FAM92A1P2-202ENST00000504766 877 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC021146.1-201ENST00000511202 716 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-798P-201ENST00000516912 103 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 Z98200.1-201ENST00000607298 470 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AL138721.1-201ENST00000616756 179 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC002553.4-201ENST00000616896 331 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00901.1-201ENST00000617252 152 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC006338.1-201ENST00000618453 749 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AL603758.1-201ENST00000618654 241 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 MIR6891-201ENST00000618788 93 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 MIR1321-201ENST00000637766 79 ntBASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RNU1-94P-201ENST00000362627 173 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-223P-201ENST00000362830 107 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-1120P-201ENST00000362988 108 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 Y_RNA.409-201ENST00000383990 98 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-432P-201ENST00000384196 109 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 MIR3065-201ENST00000390137 79 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL603766.1-201ENST00000407763 664 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 MTATP6P18-201ENST00000417994 673 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 USP9YP27-201ENST00000418455 438 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RPL23AP38-201ENST00000423801 469 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 ELOCP14-201ENST00000428070 331 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 ELOCP7-201ENST00000439968 331 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 MTCO3P18-201ENST00000440206 761 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL121871.1-201ENST00000443413 436 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 PHBP16-201ENST00000446318 950 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC140076.1-201ENST00000449897 361 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SL98P-201ENST00000462271 300 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL049714.1-201ENST00000466686 347 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 UQCRHP4-201ENST00000471686 272 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RPL7P23-201ENST00000493874 747 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC020593.1-201ENST00000507399 299 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-1095P-201ENST00000516148 108 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC118273.2-201ENST00000532092 465 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL133271.1-201ENST00000538229 291 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL359212.1-201ENST00000556608 614 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SL176P-201ENST00000580352 264 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AP000907.4-201ENST00000604143 237 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AL591034.3-201ENST00000605511 685 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AP001330.5-201ENST00000607176 411 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC004067.1-201ENST00000608733 700 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 AC093838.1-201ENST00000613014 469 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP196-201ENST00000625967 102 ntBASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms