Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 IGHV5-78-201ENST00000450948 295 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC113155.1-201ENST00000511141 769 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC127381.1-201ENST00000555979 939 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC004584.2-201ENST00000570407 410 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 RPL23AP87-202ENST00000573039 466 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 MIR4260-201ENST00000583107 67 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 MIR1244-1-201ENST00000612829 85 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 MIR1244-3-201ENST00000635744 85 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 MIR1244-2-201ENST00000636449 85 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 MIR1244-4-202ENST00000636813 85 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AC068870.1-201ENST00000563737 2455 ntBASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB11Q9Y5F2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 AP005435.3-201ENST00000531260 3198 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNU4-44P-201ENST00000363050 141 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNA5SP132-201ENST00000364725 118 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 MIR578-201ENST00000384828 96 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 MIR1250-201ENST00000408098 113 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNU6-607P-201ENST00000411283 108 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNU2-71P-201ENST00000411395 189 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RPS26P47-201ENST00000427219 348 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RPL7P5-201ENST00000471472 736 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 AC110792.1-201ENST00000491826 472 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 MRPS33P2-201ENST00000507850 322 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNU6-1095P-201ENST00000516148 108 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNU6-911P-201ENST00000516523 104 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 RNU6-914P-201ENST00000516749 109 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 AC034114.1-201ENST00000520293 285 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 FP236240.3-201ENST00000623061 327 ntBASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB11Q9Y5F2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 SAGE2P-201ENST00000420011 2126 ntBASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB11Q9Y5F2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC015799.1-201ENST00000622996 3122 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 SNORD27-201ENST00000363981 72 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.462-201ENST00000384268 102 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.471-201ENST00000384312 102 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 HSPE1P8-201ENST00000406997 288 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC006946.1-201ENST00000429106 328 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AL121871.1-201ENST00000443413 436 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 PRDX3P3-201ENST00000447765 522 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 MED28P2-201ENST00000475771 317 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 COX6B1P2-201ENST00000489624 230 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 RPS17P5-201ENST00000498293 408 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 SNRPGP16-201ENST00000533275 226 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 MIR548AC-201ENST00000585049 88 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC060780.2-201ENST00000589047 198 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC012669.1-201ENST00000603209 283 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AC027228.2-201ENST00000567141 2154 ntBASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB11Q9Y5F2 AP000432.2-201ENST00000624164 2048 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms