Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL845331.3-202ENST00000562856 261 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RN7SL600P-201ENST00000581811 299 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC010201.1-201ENST00000605051 540 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 MIR6867-201ENST00000610636 67 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC007742.2-201ENST00000618226 398 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AL713922.2-201ENST00000619384 716 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 U6.101-201ENST00000637707 76 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC090337.1-201ENST00000579651 2074 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC007685.1-201ENST00000329806 452 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RPL23AP57-201ENST00000332361 466 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RNA5SP391-201ENST00000363456 119 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-483P-201ENST00000384088 108 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 PPIAP31-201ENST00000405422 495 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RPL21P65-201ENST00000406094 466 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AL356095.1-201ENST00000417217 199 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RPL21P111-201ENST00000418453 477 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AL589872.1-201ENST00000426602 288 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RPL29P29-201ENST00000448725 423 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 HMGB3P30-201ENST00000457863 606 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC006064.5-201ENST00000541782 248 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 RPL23AP97-201ENST00000568955 471 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AL117336.2-201ENST00000602435 335 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC012507.3-201ENST00000603556 477 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 HSPE1P14-201ENST00000605812 302 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC011816.2-201ENST00000607089 556 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC128687.2-201ENST00000609657 566 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AL161734.1-201ENST00000609720 557 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC007546.1-201ENST00000619452 559 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 AC091905.1-201ENST00000624400 311 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 MIR4496-201ENST00000635896 61 ntBASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.88□□□□□ -1.63
CTDP1Q9Y5B0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-921P-201ENST00000384361 107 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 DHFRP6-201ENST00000401776 268 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RPS20P2-201ENST00000402520 389 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC004987.3-201ENST00000413879 771 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 TPMTP2-201ENST00000414372 726 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RPL31P35-201ENST00000431058 377 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 YWHAZP8-201ENST00000436935 731 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC087312.1-201ENST00000471411 480 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC087385.1-201ENST00000475062 312 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RN7SL132P-201ENST00000478131 296 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RN7SL817P-201ENST00000480777 288 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RN7SL604P-201ENST00000492589 296 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RNF138P1-201ENST00000502765 546 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 MTND3P22-201ENST00000510932 243 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC104986.1-201ENST00000517978 436 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC034268.2-201ENST00000571784 482 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 RPL7P50-201ENST00000600588 727 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AL121757.2-201ENST00000611223 313 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 AL138721.1-201ENST00000616756 179 ntBASIC4.87□□□□□ -1.63
CTDP1Q9Y5B0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms