Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC106872.3-201ENST00000495104 446 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC090453.1-201ENST00000495560 436 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC025554.1-201ENST00000505641 188 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 POU5F1P7-201ENST00000508759 541 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 MTCO2P32-201ENST00000514865 403 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC109635.4-202ENST00000531666 412 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AL139286.2-201ENST00000606838 396 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC103591.3-201ENST00000608684 209 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC006023.2-201ENST00000609916 167 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AP000254.1-201ENST00000609934 520 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC025588.4-201ENST00000615802 908 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC233309.1-201ENST00000619522 751 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 NUP58P1-201ENST00000502546 1738 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 MTND4P4-201ENST00000439033 1366 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 MTND4P16-201ENST00000466108 1367 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AF127577.6-201ENST00000623352 2191 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 MAPK10-253ENST00000641010 4072 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AP001486.2-201ENST00000561652 5113 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 SNORD9-201ENST00000362566 104 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RNA5SP258-201ENST00000362750 119 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RNA5SP50-201ENST00000363731 107 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RPL17P12-201ENST00000413391 526 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 MTCO3P41-201ENST00000414801 328 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 MTCO1P19-201ENST00000443487 500 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RPL21P104-201ENST00000464143 478 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RN7SL601P-201ENST00000471221 293 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RPL31P61-201ENST00000496160 376 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC068305.1-201ENST00000497406 726 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC004069.2-201ENST00000505438 1114 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 HSPD1P15-201ENST00000505573 1122 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 NDUFB4P9-201ENST00000511646 388 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RNU6-1073P-201ENST00000517182 106 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC103843.2-201ENST00000530523 682 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC037471.2-201ENST00000564941 598 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 ZNF192P1-203ENST00000565888 810 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 LARP7P2-201ENST00000575306 125 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 MIR3611-201ENST00000584484 83 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC083760.1-201ENST00000589621 670 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RPL23AP92-201ENST00000603609 255 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AL137849.1-201ENST00000604767 169 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AL590282.1-201ENST00000610379 1136 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 AC079684.1-201ENST00000621405 437 ntBASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK11AQ9UQ88 TPMTP2-201ENST00000414372 726 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 ST13P20-201ENST00000447996 1065 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 RPS24P6-201ENST00000452670 400 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 RBMY2UP-201ENST00000453474 324 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 USP9YP34-201ENST00000453983 808 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 ANP32BP2-201ENST00000454525 545 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 RPS26P15-201ENST00000488067 348 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC026784.1-201ENST00000507986 352 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 RN7SKP244-201ENST00000516513 307 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 MTCYBP20-201ENST00000524239 1129 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AP000889.1-201ENST00000530968 660 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC007458.1-201ENST00000542812 373 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC012414.6-201ENST00000568241 401 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 BNIP3P23-201ENST00000599655 511 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC239868.4-201ENST00000608318 671 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 AC104073.3-201ENST00000610942 955 ntBASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK11AQ9UQ88 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms