Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNVU1-6-201ENST00000364688 164 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-98P-201ENST00000384173 107 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-441P-201ENST00000384545 106 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 RNU2-28P-201ENST00000410457 189 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 PRELID3BP11-201ENST00000414230 479 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AL590139.1-201ENST00000416267 400 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 HSPE1P16-201ENST00000426640 348 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 MTCO3P2-201ENST00000457365 171 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AC091021.1-201ENST00000468051 388 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-919P-201ENST00000516731 104 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AL358913.1-201ENST00000554342 121 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AL356432.3-201ENST00000568952 465 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AC087783.2-201ENST00000605070 562 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AL450472.1-202ENST00000637286 180 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 AL442639.1-201ENST00000625030 1899 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC090017.1-201ENST00000548612 1779 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.418-201ENST00000384029 102 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-804P-201ENST00000384286 107 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-952P-201ENST00000391164 108 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 MRPL35P1-201ENST00000404272 572 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 DDX39BP1-205ENST00000422507 192 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RPS15AP27-201ENST00000449183 343 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC004801.2-202ENST00000463559 283 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL738P-201ENST00000470264 297 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC092754.1-201ENST00000472975 479 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC087879.1-201ENST00000474343 374 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RNA5SP230-201ENST00000517039 122 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 OR11H5P-201ENST00000554039 926 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 MIR4697-201ENST00000582977 78 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 MIR4660-201ENST00000583549 74 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC234771.5-201ENST00000600161 514 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC092747.3-201ENST00000603769 301 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 uc_338.18-201ENST00000615451 175 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AL138825.1-201ENST00000618587 192 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 AC074140.1-201ENST00000621617 208 ntBASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.7□□□□□ -1.34
PDZRN3Q9UPQ7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 GTF2H2B-203ENST00000508065 1432 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 SNURFL-201ENST00000309296 343 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-82P-201ENST00000363970 107 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.199-201ENST00000364014 102 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 SNORA62.1-201ENST00000364287 154 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-1317P-201ENST00000364582 104 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 POLHP1-201ENST00000411806 470 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 NOP56P2-201ENST00000447491 769 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 SNRPFP3-201ENST00000457792 225 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 RNU7-182P-201ENST00000459009 62 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC098976.1-201ENST00000513014 541 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 RNA5SP373-201ENST00000517271 95 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC024405.2-202ENST00000532731 184 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC128657.1-201ENST00000549459 145 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 MIR4703-201ENST00000577728 79 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AL627230.1-201ENST00000613077 211 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 AC123768.4-201ENST00000616244 701 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms