Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL512605.2-201ENST00000592972 256 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 VN1R80P-201ENST00000597126 338 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC105429.2-201ENST00000610567 517 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC015967.1-201ENST00000619893 476 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 NSRP1P1-201ENST00000444067 1693 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC097461.1-201ENST00000568928 2821 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RNA5SP175-201ENST00000364275 119 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.259-201ENST00000364619 101 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RNU6-196P-201ENST00000384315 107 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MIR195-201ENST00000385194 87 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL356057.3-201ENST00000402607 340 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL603908.1-201ENST00000406098 201 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MIR1179-201ENST00000408703 91 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 USP9YP13-201ENST00000417797 480 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MTND1P3-201ENST00000484956 952 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC090096.1-201ENST00000489168 390 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC104136.1-201ENST00000512969 394 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC010493.1-201ENST00000513479 292 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RNU6-1170P-201ENST00000515974 106 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 SCARNA14-201ENST00000516903 136 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL512310.1-201ENST00000548639 172 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL669831.4-202ENST00000590817 238 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL109918.3-201ENST00000603072 338 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 CTHRC1P1-201ENST00000605383 469 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC021646.1-201ENST00000605469 484 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RNU6-223P-201ENST00000362830 107 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.459-201ENST00000384251 102 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL162578.1-201ENST00000406202 378 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 NACAP7-201ENST00000407371 609 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.618-201ENST00000410949 107 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AMD1P2-201ENST00000412936 992 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MTCYBP8-201ENST00000422855 651 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 FO393419.3-201ENST00000428741 282 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RPL23AP46-201ENST00000438548 490 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL157827.1-201ENST00000447622 132 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 FABP3P2-201ENST00000453169 399 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.639-201ENST00000458981 102 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 ACTR3P3-201ENST00000480448 893 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 UBE2CP3-201ENST00000502715 450 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 KCTD9P5-201ENST00000504141 1170 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC093809.1-201ENST00000509155 340 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MTCO1P30-201ENST00000515244 580 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 HSPA8P13-201ENST00000523715 472 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 PHBP17-201ENST00000528576 541 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 ELOCP31-201ENST00000540463 467 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC103968.1-201ENST00000557841 573 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC005668.1-201ENST00000571142 476 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC009977.1-201ENST00000586015 570 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC018638.8-201ENST00000588755 281 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC012603.1-201ENST00000606424 528 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC005332.6-201ENST00000613178 446 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC008250.2-201ENST00000615261 205 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC006840.1-201ENST00000623069 542 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 AC004944.1-201ENST00000517807 3059 ntBASIC3.07□□□□□ -1.92
NOTCH3Q9UM47 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.06□□□□□ -1.92
NOTCH3Q9UM47 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms