Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AP003497.1-201ENST00000528472 562 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AP000907.2-201ENST00000530827 353 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC060771.1-201ENST00000582031 164 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC091834.1-201ENST00000614543 472 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AL591424.2-201ENST00000617023 128 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 PISRT1-201ENST00000626175 531 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL20A1Q9P218 MAPK10-372ENST00000641954 3413 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC024560.2-201ENST00000507981 1497 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL20A1Q9P218 Y_RNA.3-201ENST00000362331 103 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 RNU6-1249P-201ENST00000363237 111 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 U3.15-201ENST00000365398 212 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 RNU6-259P-201ENST00000383999 107 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 C1DP2-201ENST00000418167 426 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 MTND4LP10-201ENST00000435146 291 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 SNORD108-201ENST00000459332 71 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC012170.1-201ENST00000495139 359 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 MTND2P33-201ENST00000506452 1031 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 RNA5SP208-201ENST00000516156 78 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 Y_RNA.672-201ENST00000516289 104 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC026403.1-201ENST00000518938 295 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 CR383656.7-201ENST00000548164 174 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AC068790.3-201ENST00000602988 553 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 SNORA51-201ENST00000606420 132 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 MIR6075-201ENST00000620782 95 ntBASIC4.34□□□□□ -1.71
COL20A1Q9P218 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL20A1Q9P218 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL20A1Q9P218 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL20A1Q9P218 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL20A1Q9P218 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
COL20A1Q9P218 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL20A1Q9P218 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL20A1Q9P218 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL20A1Q9P218 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL20A1Q9P218 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL20A1Q9P218 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL20A1Q9P218 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 RNA5SP51-201ENST00000364750 119 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 MIR200C-201ENST00000384980 68 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC078974.1-201ENST00000411597 223 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 ELOCP17-201ENST00000414751 326 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 MTCO3P30-201ENST00000426425 670 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 AL451062.2-201ENST00000427515 271 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC011742.1-201ENST00000431448 434 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 KCTD9P3-201ENST00000434597 1169 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 USP9YP28-201ENST00000435142 589 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC010469.1-201ENST00000463864 576 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 TMED11P-201ENST00000479478 690 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC103783.1-201ENST00000520506 373 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC009063.1-201ENST00000563342 702 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 AC090616.5-202ENST00000582111 297 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 MIR5187-201ENST00000583479 76 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 DUXAP4-201ENST00000603046 613 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 SNORA62.6-201ENST00000606322 83 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 BX664608.1-201ENST00000610519 487 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 AL034408.1-202ENST00000636088 415 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 AL161912.2-201ENST00000565707 3007 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL20A1Q9P218 MFSD8-236ENST00000641509 4050 ntBASIC4.33□□□□□ -1.72
COL20A1Q9P218 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL20A1Q9P218 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.33□□□□□ -1.72
COL20A1Q9P218 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL20A1Q9P218 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL20A1Q9P218 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms