Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 AC023128.2-201ENST00000420880 1223 ntBASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 AL157827.1-201ENST00000447622 132 ntBASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 RNU6-84P-201ENST00000607737 102 ntBASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 VIS1.1-201ENST00000610517 203 ntBASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 AC034102.8-201ENST00000615146 484 ntBASIC3.69□□□□□ -1.82
CCDC180Q9P1Z9 DCAF13P1-201ENST00000495256 1330 ntBASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 RNA5SP490-201ENST00000517141 136 ntBASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 AL049779.4-201ENST00000604500 156 ntBASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 uc_338.5-201ENST00000611839 155 ntBASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 AL353748.2-201ENST00000622148 471 ntBASIC3.68□□□□□ -1.82
CCDC180Q9P1Z9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 RNU1-57P-201ENST00000384491 166 ntBASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 SNORA31.11-201ENST00000516528 139 ntBASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 AC103987.3-201ENST00000582071 292 ntBASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC180Q9P1Z9 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC012321.1-201ENST00000561622 1588 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 ZNF720P1-201ENST00000562403 1939 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 Z82209.1-201ENST00000422141 2135 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 RNU2-68P-201ENST00000410878 191 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 XKRY2-201ENST00000442362 1093 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC093392.2-201ENST00000450682 337 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 VN1R74P-201ENST00000613259 503 ntBASIC3.66□□□□□ -1.82
CCDC180Q9P1Z9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC180Q9P1Z9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 MIR7-2-201ENST00000384970 110 ntBASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 AC027124.2-201ENST00000428249 105 ntBASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 AC007687.1-201ENST00000602704 304 ntBASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 AC103988.1-201ENST00000566382 2177 ntBASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC180Q9P1Z9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC180Q9P1Z9 RNU2-20P-201ENST00000410425 191 ntBASIC3.64□□□□□ -1.83
CCDC180Q9P1Z9 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC180Q9P1Z9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC180Q9P1Z9 AL035411.2-201ENST00000604022 421 ntBASIC3.64□□□□□ -1.83
CCDC180Q9P1Z9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 AC025033.1-201ENST00000463883 194 ntBASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 HMGN1P28-201ENST00000521340 364 ntBASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC180Q9P1Z9 RPL19P1-201ENST00000411635 428 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 HMGB1P12-201ENST00000438594 598 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AL138799.3-201ENST00000438968 350 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 RNA5SP160-201ENST00000364866 120 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 MIR1323-201ENST00000408090 73 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 SEC63P1-201ENST00000425785 1258 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AC068781.1-201ENST00000488231 618 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AP001542.2-201ENST00000593141 364 ntBASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC180Q9P1Z9 AC009237.2-201ENST00000421358 284 ntBASIC3.61□□□□□ -1.83
CCDC180Q9P1Z9 HMGB1P27-201ENST00000431429 603 ntBASIC3.61□□□□□ -1.83
CCDC180Q9P1Z9 AC103810.1-201ENST00000579873 453 ntBASIC3.61□□□□□ -1.83
CCDC180Q9P1Z9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC180Q9P1Z9 AL590664.1-201ENST00000448065 339 ntBASIC3.6□□□□□ -1.83
CCDC180Q9P1Z9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC180Q9P1Z9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC180Q9P1Z9 RPS3AP23-202ENST00000574601 686 ntBASIC3.6□□□□□ -1.83
CCDC180Q9P1Z9 AC110774.1-201ENST00000623567 2018 ntBASIC3.6□□□□□ -1.83
CCDC180Q9P1Z9 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 RNA5SP338-201ENST00000410495 85 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 USP9YP27-201ENST00000418455 438 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 AL137159.1-201ENST00000452808 512 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 AC124283.4-201ENST00000581815 456 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 MIR502-201ENST00000606349 86 ntBASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC180Q9P1Z9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.59□□□□□ -1.84
CCDC180Q9P1Z9 AC109486.1-201ENST00000486833 374 ntBASIC3.59□□□□□ -1.84
CCDC180Q9P1Z9 MTCYBP17-201ENST00000503579 789 ntBASIC3.59□□□□□ -1.84
CCDC180Q9P1Z9 FABP5P6-201ENST00000510588 409 ntBASIC3.59□□□□□ -1.84
CCDC180Q9P1Z9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC180Q9P1Z9 AC027514.1-201ENST00000588561 1603 ntBASIC3.58□□□□□ -1.84
CCDC180Q9P1Z9 RNA5SP27-201ENST00000363839 119 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms