Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC022878.1-201ENST00000530684 149 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 OR4T1P-201ENST00000554933 911 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 MIR4286-201ENST00000580651 93 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 SEPT7P9-203ENST00000604116 343 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL359999.1-201ENST00000604513 294 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC091167.4-201ENST00000605079 184 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL592436.1-201ENST00000605135 558 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL034351.1-201ENST00000605288 668 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC008250.2-201ENST00000615261 205 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC009878.1-201ENST00000621819 340 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC243312.2-201ENST00000623340 601 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC004777.1-201ENST00000624317 287 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL773545.4-201ENST00000637262 310 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL513478.4-201ENST00000641636 310 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 SNORA40.3-201ENST00000390964 122 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RNU2-71P-201ENST00000411395 189 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 MTND1P21-201ENST00000412991 285 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 MTCO2P34-201ENST00000421994 607 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC024082.2-201ENST00000434771 238 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 FABP3P2-201ENST00000453169 399 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RN7SL132P-201ENST00000478131 296 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 PPIAP15-201ENST00000479662 484 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RPL23AP41-201ENST00000484754 458 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC022483.1-201ENST00000514020 567 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RNA5SP309-201ENST00000516670 106 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RN7SKP289-201ENST00000517244 295 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 PAICSP4-201ENST00000517543 1253 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC022616.6-201ENST00000520479 119 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC008489.1-201ENST00000524271 483 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC091516.1-201ENST00000549191 703 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC007424.1-203ENST00000554613 687 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL157394.1-201ENST00000562983 1224 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL356432.3-201ENST00000568952 465 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 COX6CP3-201ENST00000580869 223 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC053481.4-201ENST00000583164 216 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC110741.2-201ENST00000605278 268 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC121334.2-201ENST00000605387 271 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC007038.2-201ENST00000608095 740 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL355810.1-201ENST00000614629 552 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AL591424.2-201ENST00000617023 128 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AC009159.1-201ENST00000618386 642 ntBASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HCN3Q9P1Z3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC095050.2-201ENST00000510748 1458 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 TAB3P1-202ENST00000452645 1634 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 HMGN1P14-201ENST00000412459 517 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 RPL7AP73-201ENST00000413490 353 ntBASIC3.75□□□□□ -1.81
HCN3Q9P1Z3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms