Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RPL37P21-201ENST00000435890 276 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 SNRPEP7-201ENST00000438350 220 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 GDI2P2-201ENST00000445131 608 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RPS3AP46-201ENST00000448352 682 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 BX322784.1-201ENST00000455793 1077 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 PLGLA-201ENST00000465668 449 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 FTH1P2-201ENST00000466086 412 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RPL31P50-201ENST00000471002 296 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC092451.1-201ENST00000480211 153 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 FAM172BP-201ENST00000487497 1089 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 POU5F1P7-201ENST00000508759 541 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 NPM1P41-201ENST00000512920 831 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC016065.2-201ENST00000514530 444 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 HSPE1P5-201ENST00000561489 272 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 MIR5685-201ENST00000579080 79 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 PRELID3BP8-201ENST00000604148 295 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC090186.1-201ENST00000605991 572 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC012531.5-201ENST00000611375 151 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC093591.3-201ENST00000634516 308 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC004972.1-201ENST00000623934 2209 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 NMD3P1-201ENST00000439704 1488 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RNU5E-5P-201ENST00000365379 116 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RPL32P23-201ENST00000397237 405 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 SSXP10-201ENST00000402595 565 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AL445669.1-201ENST00000426743 755 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AL035410.1-201ENST00000427409 427 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC005297.2-201ENST00000450430 606 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RPS20P32-201ENST00000456044 356 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC078817.1-201ENST00000492623 435 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC090453.1-201ENST00000495560 436 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC093853.1-201ENST00000515689 483 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RNU2-58P-201ENST00000516403 183 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-405P-201ENST00000516637 110 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AP003392.2-201ENST00000527269 208 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC010546.1-201ENST00000569391 485 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 MIR5186-201ENST00000577504 120 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 SEPT7P9-203ENST00000604116 343 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AL136363.2-201ENST00000604173 851 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 RNA5SP108-201ENST00000605921 117 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC008498.1-201ENST00000613012 531 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC138932.5-201ENST00000617759 563 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 AC119674.1-207ENST00000641355 633 ntBASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.73□□□□□ -1.81
SMARCAL1Q9NZC9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms