Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 CKAP2P1-201ENST00000555477 2049 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RNU4-48P-201ENST00000365559 182 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AL590762.2-201ENST00000395798 571 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RNU6-908P-201ENST00000410160 94 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RNU2-36P-201ENST00000410361 191 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RNU2-39P-201ENST00000410604 198 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AF186996.5-201ENST00000418098 904 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 NEK4P1-201ENST00000433383 879 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RPL36AP6-201ENST00000435770 321 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC090774.1-201ENST00000435925 246 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC016691.1-201ENST00000441321 413 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 MTND3P10-201ENST00000450967 341 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC069439.1-201ENST00000494739 167 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 PPBPP1-201ENST00000510807 373 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 MYL12AP1-201ENST00000518490 515 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 DEFB109D-201ENST00000529497 240 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC069240.1-201ENST00000548774 375 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AP005205.1-201ENST00000563503 508 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC136624.4-201ENST00000573044 370 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC060780.3-201ENST00000589464 80 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 YWHAEP7-203ENST00000622054 312 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 DUXAP9-208ENST00000622815 614 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 AC004925.1-201ENST00000624256 2706 ntBASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCM2LQ9NUG4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNY3P3-201ENST00000363816 102 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNU5E-4P-201ENST00000364931 120 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNA5SP428-201ENST00000365129 132 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 MIR454-201ENST00000390180 115 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNU6-1158P-201ENST00000391167 107 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 LAP3P1-201ENST00000403648 294 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RPL7AP73-201ENST00000413490 353 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 OR51A5P-201ENST00000415429 942 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL645608.4-201ENST00000423619 154 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL138799.3-201ENST00000438968 350 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC010469.1-201ENST00000463864 576 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RPL5P30-201ENST00000465511 891 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC117522.1-201ENST00000509821 380 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNU6-358P-201ENST00000516564 75 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AP001646.1-201ENST00000527936 915 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms