Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 RNU2-54P-201ENST00000410299 190 ntBASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 RNU7-197P-201ENST00000458836 62 ntBASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 SNRPGP7-201ENST00000469016 106 ntBASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 KC877373.1-201ENST00000479066 408 ntBASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 AP005212.3-201ENST00000619964 528 ntBASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
FOXD4L1Q9NU39 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 SNORA70.5-201ENST00000365519 135 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 RNU6-178P-201ENST00000384631 104 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 U3.22-201ENST00000391120 215 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 RNU6-1199P-201ENST00000411249 104 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC006461.1-201ENST00000412637 326 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 U8.19-201ENST00000459095 133 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 RN7SL143P-201ENST00000496780 297 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 GAPDHP38-201ENST00000503632 1002 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC083906.1-201ENST00000509298 406 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC109810.1-201ENST00000534066 224 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC090049.2-201ENST00000550377 109 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 LARP7P3-201ENST00000579888 337 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 RN7SL820P-201ENST00000616437 299 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AL354798.1-201ENST00000622505 329 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AL355480.4-201ENST00000626823 69 ntBASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXD4L1Q9NU39 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
FOXD4L1Q9NU39 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
FOXD4L1Q9NU39 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 RNU4-81P-201ENST00000363561 144 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 Y_RNA.179-201ENST00000363844 90 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 SNORA22-201ENST00000383907 134 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 MIR1290-201ENST00000408735 78 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 RBM22P7-201ENST00000421321 280 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 RPL21P126-201ENST00000470049 478 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 RN7SL379P-201ENST00000479912 293 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 UBE2CP3-201ENST00000502715 450 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AC087752.2-201ENST00000521219 281 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AP001328.1-201ENST00000528550 176 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 uc_338.26-201ENST00000612659 160 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 MESTIT1_1.1-201ENST00000618871 140 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 AC079753.1-201ENST00000623243 3868 ntBASIC8.08□□□□□ -1.12
FOXD4L1Q9NU39 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXD4L1Q9NU39 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXD4L1Q9NU39 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXD4L1Q9NU39 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXD4L1Q9NU39 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXD4L1Q9NU39 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXD4L1Q9NU39 RNU1-140P-201ENST00000365040 165 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms