Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CISHQ9NSE2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 RNU1-73P-201ENST00000383971 164 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 Y_RNA.493-201ENST00000384422 102 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 DSTNP4-201ENST00000399472 474 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 Z86062.1-201ENST00000406773 777 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 RNU4-78P-201ENST00000410940 126 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC092427.1-202ENST00000430569 476 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC234775.1-201ENST00000454247 670 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC009901.1-201ENST00000506703 541 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC008676.3-201ENST00000521237 435 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC087373.1-201ENST00000524920 491 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AP003385.6-201ENST00000531603 374 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CISHQ9NSE2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC009063.1-201ENST00000563342 702 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC087481.2-201ENST00000565492 330 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 MIR4504-201ENST00000577413 92 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 CBX3P2-202ENST00000583365 535 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC106791.2-201ENST00000604680 391 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC079610.2-201ENST00000604818 690 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC009570.1-201ENST00000609599 745 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC092650.2-201ENST00000619984 902 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC007275.1-201ENST00000621243 671 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 AC138915.1-201ENST00000565427 1685 ntBASIC2.36□□□□□ -2.03
CISHQ9NSE2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.36□□□□□ -2.03
CISHQ9NSE2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CISHQ9NSE2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CISHQ9NSE2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 AL445529.1-201ENST00000398713 389 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AL356057.2-201ENST00000403318 432 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 U3.37-201ENST00000408528 213 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 BX682237.1-201ENST00000415016 335 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AL096701.2-201ENST00000416920 238 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 AL513321.1-201ENST00000441175 761 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 RPL23AP20-201ENST00000447965 421 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 DNAJC19P8-201ENST00000452887 259 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AL031183.1-201ENST00000457667 207 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 RNA5SP310-201ENST00000459084 116 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 RPL23AP94-201ENST00000512518 302 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 MTND5P4-201ENST00000514978 288 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 RNA5SP200-201ENST00000516360 103 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 RNU6-889P-201ENST00000517189 103 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CISHQ9NSE2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 C1DP5-201ENST00000525775 383 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AP002770.2-201ENST00000543613 532 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 SNRPGP18-201ENST00000553000 214 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 MIR4435-1-201ENST00000582552 80 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 XIAPP1-201ENST00000603162 600 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 NUTF2P8-201ENST00000604593 363 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 HSPE1P14-201ENST00000605812 302 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 AC002064.3-201ENST00000623448 346 ntBASIC2.35□□□□□ -2.03
CISHQ9NSE2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.35□□□□□ -2.03
CISHQ9NSE2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CISHQ9NSE2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CISHQ9NSE2 ZNF734P-201ENST00000419494 1534 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 RNA5SP252-201ENST00000391131 119 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 AL024474.1-201ENST00000404655 591 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 RNA5SP508-201ENST00000411327 119 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 AL139413.1-201ENST00000421309 217 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 HMGN1P5-201ENST00000448591 263 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 TTC39CP1-201ENST00000512513 755 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 AC008549.1-201ENST00000512900 643 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 HMGB1P46-201ENST00000520062 610 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 AC018618.2-201ENST00000604770 446 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 AC104237.2-201ENST00000612456 443 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 MIR6076-201ENST00000617521 113 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 AC097372.4-201ENST00000625025 466 ntBASIC2.34□□□□□ -2.03
CISHQ9NSE2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 U6.107-201ENST00000637108 79 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms