Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 HMGN1P14-201ENST00000412459 517 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC108032.1-201ENST00000416706 207 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 MORF4L1P6-201ENST00000418771 268 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC016907.1-201ENST00000419483 435 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 TPT1P14-201ENST00000448018 505 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 NUTF2P7-201ENST00000453086 375 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 SSXP1-201ENST00000453640 473 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC055855.1-201ENST00000489563 579 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RNU2-58P-201ENST00000516403 183 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RN7SKP21-201ENST00000516503 220 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-798P-201ENST00000516912 103 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC024909.2-201ENST00000553035 286 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 FAM60BP-201ENST00000578364 658 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 BNIP3P8-201ENST00000597863 560 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC119751.7-201ENST00000600494 245 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC068790.3-201ENST00000602988 553 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 MIR6867-201ENST00000610636 67 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC009159.1-201ENST00000618386 642 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AL603839.4-201ENST00000624658 1005 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 RNU4-24P-201ENST00000364565 139 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 MIR199A2-201ENST00000385289 110 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 MIR1193-201ENST00000408109 78 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 USP9YP13-201ENST00000417797 480 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL691449.1-201ENST00000426570 421 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 VDAC1P3-201ENST00000434069 851 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 RPL35AP22-201ENST00000436855 335 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 FTH1P1-201ENST00000437933 532 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC004866.2-201ENST00000438285 481 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 SNORA71B-202ENST00000439232 272 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 PDSS1P2-201ENST00000449397 678 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 CBX3P3-201ENST00000508108 532 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 RN7SKP244-201ENST00000516513 307 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC022616.6-201ENST00000520479 119 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 OR4T1P-201ENST00000554933 911 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL356432.3-201ENST00000568952 465 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC005771.1-201ENST00000585581 349 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC022146.1-201ENST00000595307 847 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC011468.4-201ENST00000603942 409 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC004908.2-201ENST00000609090 574 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL450472.3-201ENST00000615578 367 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC108479.2-201ENST00000617314 601 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC112204.3-201ENST00000623822 332 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AL138713.1-201ENST00000624026 2130 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC004777.1-201ENST00000624317 287 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms