Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MTATP6P20-201ENST00000414147 562 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 RPS3AP37-201ENST00000419176 745 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 RPL23AP76-201ENST00000441860 458 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL589880.1-201ENST00000448271 287 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 RPS15AP17-201ENST00000470598 390 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC011979.1-201ENST00000472300 483 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 HMGB1P28-201ENST00000507778 552 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC006390.1-201ENST00000508068 283 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC004062.1-201ENST00000509926 645 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC008837.2-201ENST00000513076 418 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC090136.1-201ENST00000520009 240 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL132657.2-201ENST00000564417 358 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC005951.1-201ENST00000576706 485 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 MIR2682-201ENST00000580305 110 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AP001029.3-201ENST00000588063 596 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC006539.2-201ENST00000601729 572 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC069304.2-201ENST00000605154 435 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL157392.4-201ENST00000609756 345 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 MIR6852-201ENST00000621699 66 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC018692.3-201ENST00000623929 123 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 MIR1322-201ENST00000638013 71 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HPS4Q9NQG7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HPS4Q9NQG7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 RNU6-413P-201ENST00000384115 107 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 SNORD51-201ENST00000384320 80 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 RNU6-878P-201ENST00000384578 110 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 RNU4-22P-201ENST00000411058 166 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC068533.2-201ENST00000411872 306 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 RPL23AP74-201ENST00000437246 471 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 NANOGNBP1-201ENST00000448444 480 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 MTND2P19-201ENST00000449129 1012 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC114322.1-201ENST00000506771 926 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 MIR2276-201ENST00000516886 89 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 SLC2A13P1-201ENST00000531560 322 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 OR4H12P-201ENST00000556269 907 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 BNIP3P11-201ENST00000603878 563 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AL033523.1-201ENST00000605153 153 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AL157817.1-201ENST00000614264 790 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
HPS4Q9NQG7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS4Q9NQG7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 NACA3P-201ENST00000359690 648 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 SNORA80A-201ENST00000363922 136 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms