Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PPIAP3-201ENST00000450588 505 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 HLA-DPA3-207ENST00000454398 229 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 RN7SL443P-201ENST00000464331 290 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC117503.1-201ENST00000472241 394 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC004453.1-201ENST00000487895 408 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 CEACAMP10-202ENST00000495431 496 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC110794.1-201ENST00000505816 425 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 RNU6-470P-201ENST00000515954 104 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 SNORA14.1-201ENST00000516113 141 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 RNU6-635P-201ENST00000516651 102 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC027544.3-201ENST00000535082 757 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC138207.8-204ENST00000579588 527 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL031320.1-201ENST00000604177 357 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC009570.1-201ENST00000609599 745 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL359893.1-201ENST00000447628 1580 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 AP001273.1-201ENST00000624493 3152 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 RNA5SP319-201ENST00000362768 119 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 SNORA73.1-201ENST00000363107 205 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RNU6-1284P-201ENST00000363701 100 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RNA5SP234-201ENST00000363916 119 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RNA5SP339-201ENST00000390987 122 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AL109755.1-201ENST00000401791 649 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 RPL7P10-201ENST00000417407 739 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 EI24P4-201ENST00000423683 1078 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 RSL24D1P6-201ENST00000426934 401 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 RPS26P2-201ENST00000440331 348 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RPS29P9-201ENST00000440360 171 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 H2AFZP6-201ENST00000444403 394 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC007967.1-201ENST00000455422 1159 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RPL5P30-201ENST00000465511 891 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RPS20P21-201ENST00000466859 343 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 RN7SL51P-201ENST00000468230 285 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC087884.1-201ENST00000469738 328 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC015911.1-201ENST00000495111 156 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 IGKV2D-36-201ENST00000518643 226 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 IGLVIV-53-201ENST00000520107 367 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC100870.1-201ENST00000522035 505 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 RPL10P14-201ENST00000565265 298 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC010547.6-201ENST00000571789 193 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 AL109918.3-201ENST00000603072 338 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC116447.1-201ENST00000613153 453 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 AL161637.1-201ENST00000622380 412 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AL445363.3-201ENST00000623080 671 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 AP001784.1-201ENST00000624107 428 ntBASIC5.03□□□□□ -1.6
SSU72Q9NP77 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSU72Q9NP77 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.03□□□□□ -1.6
SSU72Q9NP77 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSU72Q9NP77 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSU72Q9NP77 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSU72Q9NP77 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSU72Q9NP77 RNU11-4P-201ENST00000391149 133 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AL583834.1-201ENST00000406943 343 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 RNU6-847P-201ENST00000411115 108 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 RNU6-603P-201ENST00000411403 107 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 E2F6P2-201ENST00000420708 748 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 RPL35AP22-201ENST00000436855 335 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AC010655.1-201ENST00000449336 292 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AL691482.1-201ENST00000453255 87 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 RPS27AP1-201ENST00000475545 471 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 AP001086.1-201ENST00000494882 321 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 Y_RNA.668-201ENST00000516233 93 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 Y_RNA.708-201ENST00000516950 96 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AC009812.2-201ENST00000517657 457 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms