Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL21P133-201ENST00000443666 476 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 HMGB3P22-202ENST00000451823 572 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 SNRPFP3-201ENST00000457792 225 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RPL35AP28-201ENST00000459730 331 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RPL23AP11-201ENST00000475260 469 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 HMGB1P21-201ENST00000502313 581 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 CCDC34P1-201ENST00000507441 517 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RPL39P5-202ENST00000512505 151 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RNU7-51P-201ENST00000516560 62 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-798P-201ENST00000516912 103 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RANP9-201ENST00000519957 271 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC022634.1-201ENST00000520765 532 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RPL23AP53-201ENST00000521854 457 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AP000889.2-201ENST00000532684 490 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 TVP23CP2-201ENST00000571473 623 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RN7SL52P-201ENST00000584271 284 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL355598.1-201ENST00000604169 202 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC025588.3-201ENST00000604182 274 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL592436.1-201ENST00000605135 558 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AP000654.2-201ENST00000605633 586 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC023813.4-201ENST00000607580 580 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL390240.1-201ENST00000612950 384 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL590099.1-201ENST00000615276 138 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RMST_9.1-201ENST00000619945 193 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC087385.3-201ENST00000620477 187 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 U6.114-201ENST00000636407 96 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC119674.1-207ENST00000641355 633 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 A2MP1-204ENST00000566278 4130 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL442639.1-201ENST00000625030 1899 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 MTND5P28-201ENST00000438005 1594 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-249P-201ENST00000363016 102 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-505P-201ENST00000384427 107 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RN7SKP158-201ENST00000410453 326 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RNU2-15P-201ENST00000410692 191 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 HMGN1P24-201ENST00000412282 298 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 OR2AM1P-201ENST00000422137 422 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RPL31P12-201ENST00000422587 358 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL137792.2-201ENST00000443484 235 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 MTCO3P10-201ENST00000455912 772 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 MIR2053-201ENST00000459295 91 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RPL7P43-201ENST00000478876 753 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RN7SL97P-201ENST00000486780 299 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RPL30P11-201ENST00000495304 339 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC025164.1-201ENST00000496249 478 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RPS27AP18-201ENST00000515536 459 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-566P-201ENST00000516790 107 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 snoU109.6-201ENST00000516831 118 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 MIR4646-201ENST00000580775 63 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC104687.2-201ENST00000604442 342 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC007938.3-201ENST00000604965 623 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 Z82243.1-201ENST00000609432 473 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 DUSP12P1-201ENST00000612874 516 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 MIR8069-1-201ENST00000616627 86 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AC087588.2-201ENST00000617667 426 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 AL713922.2-201ENST00000619384 716 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 MIR8069-2-201ENST00000621412 86 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms