Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 SNORD39.3-201ENST00000584451 71 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC005771.1-201ENST00000585581 349 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 PRELID3BP8-201ENST00000604148 295 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC107304.1-201ENST00000604229 296 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AL021997.1-201ENST00000605757 193 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC098614.4-201ENST00000607601 462 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC069200.1-201ENST00000609511 323 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC018755.4-201ENST00000619715 454 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 AC099654.12-201ENST00000639868 649 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 Z73965.1-201ENST00000623412 2297 ntBASIC3.11□□□□□ -1.91
PCNX3Q9H6A9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RNU5F-6P-201ENST00000362979 116 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC019155.1-201ENST00000382242 574 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MTCYBP36-201ENST00000404146 440 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC006989.1-201ENST00000427212 131 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MTCO1P27-201ENST00000448269 226 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 SNRPFP4-201ENST00000456366 242 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC109925.1-201ENST00000478069 331 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC109464.2-201ENST00000510242 943 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC024589.1-201ENST00000512207 263 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RNU6-314P-201ENST00000516574 104 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 OR4A45P-201ENST00000529954 901 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC008127.2-201ENST00000549925 1075 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AGGF1P8-201ENST00000562979 1000 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MTCO3P24-201ENST00000572729 782 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC010200.2-201ENST00000605098 235 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AP001521.1-201ENST00000609150 300 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC103710.1-201ENST00000610003 901 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AP003355.3-201ENST00000623465 114 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC117529.2-201ENST00000512159 2068 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MTND5P28-201ENST00000438005 1594 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 Y_RNA.3-201ENST00000362331 103 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RNU6-921P-201ENST00000384361 107 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MIR218-2-201ENST00000385006 110 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 Y_RNA.598-201ENST00000410480 95 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RPS7P15-201ENST00000415804 584 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MTCYBP5-201ENST00000423752 1135 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 TRBV26-201ENST00000456572 344 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RNU7-136P-201ENST00000458819 69 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 snoU109.1-201ENST00000459339 135 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AP000797.1-201ENST00000478870 387 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 RPL9P33-201ENST00000484311 566 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC090453.1-201ENST00000495560 436 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC021678.1-201ENST00000505195 936 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 FABP5P5-201ENST00000515537 406 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC087481.2-201ENST00000565492 330 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 MIR4512-201ENST00000583257 77 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 CKS1BP3-201ENST00000600888 237 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC112187.2-201ENST00000604345 283 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AC090578.1-201ENST00000604955 591 ntBASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.1□□□□□ -1.91
PCNX3Q9H6A9 AP002907.1-201ENST00000606361 1430 ntBASIC3.09□□□□□ -1.91
PCNX3Q9H6A9 AL049781.1-201ENST00000623195 3585 ntBASIC3.09□□□□□ -1.91
PCNX3Q9H6A9 AL161781.1-201ENST00000354277 403 ntBASIC3.09□□□□□ -1.91
PCNX3Q9H6A9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms