Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RNU6-28P-201ENST00000362378 107 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RNU6-343P-201ENST00000364709 104 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RNU2-43P-201ENST00000410306 190 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AL513175.2-201ENST00000422071 443 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 ARPC3P5-201ENST00000448802 534 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 PDSS1P2-201ENST00000449397 678 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RPL7P5-201ENST00000471472 736 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 UBE2V1P12-201ENST00000503954 474 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC017037.2-201ENST00000513850 890 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RN7SKP43-201ENST00000516173 320 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 SNORA70.16-201ENST00000516390 95 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 ERHP1-201ENST00000523006 310 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC007458.1-201ENST00000542812 373 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 MIR4429-201ENST00000580105 73 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC131235.4-201ENST00000609288 620 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC009570.1-201ENST00000609599 745 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AL133445.2-201ENST00000611191 527 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AC231657.1-201ENST00000624313 397 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 OR8B1P-202ENST00000641132 1178 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 AL022578.1-201ENST00000439330 1433 ntBASIC3.25□□□□□ -1.89
DDX47Q9H0S4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX47Q9H0S4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AL390862.1-201ENST00000635467 1469 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 FRG1BP-201ENST00000278882 761 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 Y_RNA.192-201ENST00000363977 102 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 RNU4-68P-201ENST00000364314 141 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 MIR23B-201ENST00000384832 97 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 MIR493-201ENST00000385254 89 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 RNU6-952P-201ENST00000391164 108 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 RPL23AP29-201ENST00000397284 453 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC110754.1-201ENST00000399740 601 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AL139421.1-201ENST00000423010 169 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC108734.1-201ENST00000439549 399 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 RNA5SP310-201ENST00000459084 116 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 MTND1P16-201ENST00000465177 898 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 HMGN2P13-201ENST00000476476 274 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC108860.1-201ENST00000484521 383 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC006499.5-201ENST00000505037 514 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC079395.1-201ENST00000510981 262 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 RN7SKP157-201ENST00000516174 282 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC055876.1-202ENST00000567053 138 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 MIR4444-1-201ENST00000581696 74 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 MIR4444-2-201ENST00000584390 74 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC013444.2-201ENST00000603317 787 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC073657.2-201ENST00000605661 303 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC092354.2-201ENST00000607786 514 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC002076.2-201ENST00000617362 122 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC109809.1-201ENST00000619665 545 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX47Q9H0S4 Z83843.1-201ENST00000604070 3685 ntBASIC3.24□□□□□ -1.89
DDX47Q9H0S4 AC090740.1-201ENST00000623193 2262 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC005539.1-201ENST00000443768 1479 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 Y_RNA.311-201ENST00000365068 96 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms