Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 SAR1AP4-201ENST00000429225 591 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 COX6CP2-201ENST00000444980 225 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 RPL36AP33-201ENST00000450395 310 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AL513124.1-201ENST00000450410 614 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 HSPE1P6-201ENST00000479457 291 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC048346.1-201ENST00000510247 144 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 RNU6-237P-201ENST00000515985 71 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC104986.1-201ENST00000517978 436 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AP000790.1-201ENST00000528891 737 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 OR4R2P-201ENST00000530815 597 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AL669831.4-202ENST00000590817 238 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC002487.1-201ENST00000604565 994 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 VN1R74P-201ENST00000613259 503 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 RNU6-468P-201ENST00000384003 109 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 SNORA70B-201ENST00000384210 135 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL121978.1-201ENST00000402778 359 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 ELOCP13-201ENST00000443934 329 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RPL23AP31-201ENST00000456160 467 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 HMGB1P22-201ENST00000505315 124 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 HMGB3P15-201ENST00000507326 574 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RNA5SP282-201ENST00000516355 108 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 SNORA31.21-201ENST00000517180 77 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AP004371.1-201ENST00000525240 214 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AP003385.6-201ENST00000531603 374 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 LSM6P2-201ENST00000552208 177 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL158211.2-201ENST00000607282 395 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC090116.1-201ENST00000615679 446 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL590808.1-201ENST00000618696 141 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AP001350.1-201ENST00000601906 1524 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RNU6-115P-201ENST00000364310 107 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RNU6-339P-201ENST00000384310 107 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 MYL8P-204ENST00000431574 518 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 SEPT14P24-201ENST00000447236 180 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 NDUFA5P7-201ENST00000452914 242 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 VN1R17P-201ENST00000472048 1090 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC012181.1-201ENST00000479895 423 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 OR5H5P-201ENST00000503164 928 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RNU5A-7P-201ENST00000515979 116 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC109635.4-202ENST00000531666 412 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 MTND4LP25-201ENST00000570218 163 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AL355812.1-201ENST00000603215 216 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 RPAP2P1-201ENST00000603626 1168 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 MIR6817-201ENST00000615588 66 ntBASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.25□□□□□ -1.89
RPAP1Q9BWH6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 ELF2P3-201ENST00000445099 1506 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC109315.1-201ENST00000584143 1347 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC130650.2-201ENST00000618736 2403 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 RNU6-575P-201ENST00000411326 105 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 RPL21P66-201ENST00000426566 466 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC006548.1-201ENST00000427470 102 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 RPL31P54-201ENST00000429803 370 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 RPL36AP6-201ENST00000435770 321 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 TRIM60P18-201ENST00000441518 828 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 RPL39P40-201ENST00000445481 146 ntBASIC3.24□□□□□ -1.89
RPAP1Q9BWH6 ST13P20-201ENST00000447996 1065 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms