Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMOQ99835 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMOQ99835 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 RNA5SP513-201ENST00000364648 118 ntBASIC4.3□□□□□ -1.72
SMOQ99835 SNORA20.2-201ENST00000383922 131 ntBASIC4.3□□□□□ -1.72
SMOQ99835 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.3□□□□□ -1.72
SMOQ99835 HSPD1P16-201ENST00000402302 394 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.3□□□□□ -1.72
SMOQ99835 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.3□□□□□ -1.72
SMOQ99835 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.3□□□□□ -1.72
SMOQ99835 AL139413.1-201ENST00000421309 217 ntBASIC4.3□□□□□ -1.72
SMOQ99835 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.3□□□□□ -1.72
SMOQ99835 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.3□□□□□ -1.72
SMOQ99835 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.3□□□□□ -1.72
SMOQ99835 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 AL162151.2-201ENST00000448875 158 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 AC134698.5-201ENST00000519444 336 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.3□□□□□ -1.72
SMOQ99835 AC022616.3-201ENST00000523940 148 ntBASIC4.3□□□□□ -1.72
SMOQ99835 OR4P1P-201ENST00000530808 1136 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AP003034.1-201ENST00000534621 422 ntBASIC4.3□□□□□ -1.72
SMOQ99835 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 OR8R1P-201ENST00000543943 764 ntBASIC4.3□□□□□ -1.72
SMOQ99835 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 AC068446.3-201ENST00000555285 382 ntBASIC4.3□□□□□ -1.72
SMOQ99835 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 CYP4A43P-201ENST00000568156 121 ntBASIC4.3□□□□□ -1.72
SMOQ99835 MIR3146-201ENST00000580367 79 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC012417.1-201ENST00000582307 1039 ntBASIC4.3□□□□□ -1.72
SMOQ99835 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMOQ99835 AC012507.3-201ENST00000603556 477 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AL136363.1-201ENST00000605349 337 ntBASIC4.3□□□□□ -1.72
SMOQ99835 LARP7P1-201ENST00000605576 316 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC069234.5-201ENST00000611056 416 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AL590099.1-201ENST00000615276 138 ntBASIC4.3□□□□□ -1.72
SMOQ99835 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.3□□□□□ -1.72
SMOQ99835 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
SMOQ99835 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.3□□□□□ -1.72
SMOQ99835 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMOQ99835 AC074029.4-201ENST00000624796 1859 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC009902.3-201ENST00000606235 2172 ntBASIC4.3□□□□□ -1.72
SMOQ99835 AC022893.2-201ENST00000564832 3296 ntBASIC4.29□□□□□ -1.72
SMOQ99835 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 IQCB2P-201ENST00000401788 1633 ntBASIC4.29□□□□□ -1.72
SMOQ99835 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SMOQ99835 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SMOQ99835 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SMOQ99835 SNORA72.1-201ENST00000363485 129 ntBASIC4.29□□□□□ -1.72
SMOQ99835 RNU6-169P-201ENST00000365336 107 ntBASIC4.29□□□□□ -1.72
SMOQ99835 RNU6-114P-201ENST00000384704 105 ntBASIC4.29□□□□□ -1.72
SMOQ99835 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.29□□□□□ -1.72
SMOQ99835 PPIAP31-201ENST00000405422 495 ntBASIC4.29□□□□□ -1.72
SMOQ99835 RN7SKP263-201ENST00000411194 309 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AC009237.5-201ENST00000414271 501 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AC138393.2-201ENST00000414742 246 ntBASIC4.29□□□□□ -1.72
SMOQ99835 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 RPS15AP12-201ENST00000419498 388 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 AC119618.1-201ENST00000434191 222 ntBASIC4.29□□□□□ -1.72
SMOQ99835 TBCAP1-201ENST00000436520 327 ntBASIC4.29□□□□□ -1.72
SMOQ99835 FTH1P1-201ENST00000437933 532 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.29□□□□□ -1.72
SMOQ99835 RPL23AP20-201ENST00000447965 421 ntBASIC4.29□□□□□ -1.72
SMOQ99835 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 AL162388.1-201ENST00000450912 352 ntBASIC4.29□□□□□ -1.72
SMOQ99835 RPL23AP2-201ENST00000471227 466 ntBASIC4.29□□□□□ -1.72
SMOQ99835 RPL23AP41-201ENST00000484754 458 ntBASIC4.29□□□□□ -1.72
SMOQ99835 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.29□□□□□ -1.72
SMOQ99835 AC020893.1-201ENST00000502452 580 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AC098799.2-201ENST00000509466 868 ntBASIC4.29□□□□□ -1.72
SMOQ99835 FTH1P21-201ENST00000512179 511 ntBASIC4.29□□□□□ -1.72
SMOQ99835 RNU6-528P-201ENST00000516926 100 ntBASIC4.29□□□□□ -1.72
SMOQ99835 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.29□□□□□ -1.72
SMOQ99835 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 AL512310.1-201ENST00000548639 172 ntBASIC4.29□□□□□ -1.72
SMOQ99835 MTND6P33-201ENST00000571794 183 ntBASIC4.29□□□□□ -1.72
SMOQ99835 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.29□□□□□ -1.72
SMOQ99835 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 AC068790.3-201ENST00000602988 553 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AL451044.1-201ENST00000604867 238 ntBASIC4.29□□□□□ -1.72
SMOQ99835 MIR6868-201ENST00000611215 58 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SMOQ99835 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AC040168.1-201ENST00000623594 991 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AL159972.1-201ENST00000625150 448 ntBASIC4.29□□□□□ -1.72
SMOQ99835 AC055839.1-201ENST00000634467 498 ntBASIC4.29□□□□□ -1.72
SMOQ99835 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SMOQ99835 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SMOQ99835 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
SMOQ99835 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms