Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 USP9YP7-201ENST00000436723 430 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC004866.2-201ENST00000438285 481 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AL136380.1-201ENST00000447970 162 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 NUTF2P3-201ENST00000448540 384 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 USP9YP32-201ENST00000452432 430 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 RPS23P7-201ENST00000466210 444 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 UQCRHP4-201ENST00000471686 272 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 RPL7P23-201ENST00000493874 747 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 CEACAMP10-202ENST00000495431 496 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC135721.1-201ENST00000497954 479 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC020593.1-201ENST00000507399 299 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 Vault.1-201ENST00000516474 102 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 SNORA31.20-201ENST00000517111 133 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 DEFB108D-201ENST00000527787 222 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 PHBP17-201ENST00000528576 541 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC125611.2-201ENST00000551907 647 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AL022099.1-201ENST00000604551 712 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AL590392.1-201ENST00000604960 446 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC245517.5-201ENST00000611529 162 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 uc_338.32-201ENST00000615087 172 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 LARP1BP1-201ENST00000506036 1359 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NPAS1Q99742 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 HSPA8P1-201ENST00000425843 1833 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC010300.1-201ENST00000600671 5134 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NPAS1Q99742 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 AL365440.1-201ENST00000436135 2167 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.82□□□□□ -1.8
NPAS1Q99742 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NPAS1Q99742 MIR383-201ENST00000362257 73 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 RN7SKP226-201ENST00000364912 300 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 SNORA62-201ENST00000365493 153 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 RNU6-517P-201ENST00000384362 110 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 FCF1P9-201ENST00000412546 282 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AL161631.1-201ENST00000417933 486 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC007283.2-201ENST00000424739 197 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 COX6B1P7-201ENST00000430845 235 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC093156.1-201ENST00000440382 670 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 NPM1P49-201ENST00000448027 714 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AL049714.1-201ENST00000466686 347 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 RPS29P19-201ENST00000479709 171 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 RPS15AP36-201ENST00000492022 382 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 VN1R104P-201ENST00000505115 1009 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 KLHL2P1-201ENST00000508691 521 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 FTH1P9-201ENST00000513251 355 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 RN7SKP122-201ENST00000515923 296 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 MED28P5-201ENST00000528254 438 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 MTCYBP41-201ENST00000528913 1123 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC018630.1-201ENST00000541376 925 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC087481.2-201ENST00000565492 330 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.82□□□□□ -1.8
NPAS1Q99742 AC012182.1-201ENST00000570133 895 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS1Q99742 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
NPAS1Q99742 BNIP3P33-201ENST00000598912 569 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms