Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPP40P2-201ENST00000603596 712 ntBASIC3.07□□□□□ -1.92
IFT140Q96RY7 AC010297.1-201ENST00000623948 149 ntBASIC3.07□□□□□ -1.92
IFT140Q96RY7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
IFT140Q96RY7 Y_RNA.112-201ENST00000363250 102 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 SAR1AP2-201ENST00000392696 594 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 RAB9AP5-201ENST00000437794 597 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 HSPE1P28-201ENST00000443139 211 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 RAB9AP2-201ENST00000443911 597 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 AC243772.1-201ENST00000451620 410 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 AL137159.1-201ENST00000452808 512 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 AC004486.1-201ENST00000546846 233 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 ZNF192P1-203ENST00000565888 810 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 AL159169.2-201ENST00000610061 1269 ntBASIC3.06□□□□□ -1.92
IFT140Q96RY7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
IFT140Q96RY7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
IFT140Q96RY7 RNU6-146P-201ENST00000384602 108 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 HMGB1P10-201ENST00000395823 563 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 RNU2-37P-201ENST00000410695 177 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.05□□□□□ -1.92
IFT140Q96RY7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.05□□□□□ -1.92
IFT140Q96RY7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.05□□□□□ -1.92
IFT140Q96RY7 AC104986.1-201ENST00000517978 436 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
IFT140Q96RY7 AC087241.2-201ENST00000535801 324 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 AL512598.1-201ENST00000610158 273 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.05□□□□□ -1.92
IFT140Q96RY7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
IFT140Q96RY7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
IFT140Q96RY7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.05□□□□□ -1.92
IFT140Q96RY7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
IFT140Q96RY7 RNA5SP167-201ENST00000365461 116 ntBASIC3.04□□□□□ -1.92
IFT140Q96RY7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.04□□□□□ -1.92
IFT140Q96RY7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.04□□□□□ -1.92
IFT140Q96RY7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
IFT140Q96RY7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
IFT140Q96RY7 MTND4P13-201ENST00000402078 1023 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 AC013404.1-201ENST00000413068 249 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 MTND2P16-201ENST00000419987 799 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 HSPE1P22-201ENST00000456856 327 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.03□□□□□ -1.92
IFT140Q96RY7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.03□□□□□ -1.92
IFT140Q96RY7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.03□□□□□ -1.92
IFT140Q96RY7 AC019159.1-201ENST00000605094 187 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 AL110115.1-201ENST00000614396 364 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 RMST_2.1-201ENST00000617263 136 ntBASIC3.03□□□□□ -1.92
IFT140Q96RY7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.03□□□□□ -1.92
IFT140Q96RY7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.03□□□□□ -1.92
IFT140Q96RY7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
IFT140Q96RY7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
IFT140Q96RY7 U3.15-201ENST00000365398 212 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 RNU2-20P-201ENST00000410425 191 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.03□□□□□ -1.93
IFT140Q96RY7 FO393414.1-201ENST00000428697 1184 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.03□□□□□ -1.93
IFT140Q96RY7 TOMM22P6-201ENST00000465035 409 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 AC008571.1-201ENST00000467232 300 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
IFT140Q96RY7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.03□□□□□ -1.93
IFT140Q96RY7 AP005136.1-201ENST00000579765 429 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 AL137847.3-201ENST00000611521 109 ntBASIC3.03□□□□□ -1.93
IFT140Q96RY7 AC110774.1-201ENST00000623567 2018 ntBASIC3.02□□□□□ -1.93
IFT140Q96RY7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
IFT140Q96RY7 AL118496.1-201ENST00000440201 1812 ntBASIC3.02□□□□□ -1.93
IFT140Q96RY7 DCAF13P1-201ENST00000495256 1330 ntBASIC3.02□□□□□ -1.93
IFT140Q96RY7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
IFT140Q96RY7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.02□□□□□ -1.93
IFT140Q96RY7 AC080013.2-201ENST00000460866 323 ntBASIC3.02□□□□□ -1.93
IFT140Q96RY7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.02□□□□□ -1.93
IFT140Q96RY7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.02□□□□□ -1.93
IFT140Q96RY7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
IFT140Q96RY7 Y_RNA.327-201ENST00000365201 102 ntBASIC3.01□□□□□ -1.93
IFT140Q96RY7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
IFT140Q96RY7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.01□□□□□ -1.93
IFT140Q96RY7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.01□□□□□ -1.93
IFT140Q96RY7 PPP1R2P5-201ENST00000457256 603 ntBASIC3.01□□□□□ -1.93
IFT140Q96RY7 TTC39CP1-201ENST00000512513 755 ntBASIC3.01□□□□□ -1.93
IFT140Q96RY7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.01□□□□□ -1.93
IFT140Q96RY7 AC103987.3-201ENST00000582071 292 ntBASIC3.01□□□□□ -1.93
IFT140Q96RY7 AL356575.1-201ENST00000603008 283 ntBASIC3.01□□□□□ -1.93
IFT140Q96RY7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.01□□□□□ -1.93
IFT140Q96RY7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
IFT140Q96RY7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
IFT140Q96RY7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3□□□□□ -1.93
IFT140Q96RY7 AL391987.6-201ENST00000305671 199 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 EIF1AXP1-201ENST00000419267 435 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC009237.2-201ENST00000421358 284 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC129850.1-201ENST00000436203 508 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC009961.3-201ENST00000449832 765 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC093392.2-201ENST00000450682 337 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3□□□□□ -1.93
IFT140Q96RY7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3□□□□□ -1.93
IFT140Q96RY7 MYL12BP1-201ENST00000569826 507 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms