Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR4472-2-201ENST00000582069 67 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC011477.5-201ENST00000586571 259 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 UBE2L4-201ENST00000587688 464 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC087588.2-201ENST00000617667 426 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 uc_338.22-201ENST00000622722 187 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC011944.2-201ENST00000624440 683 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 THAP12P5-201ENST00000405864 2275 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AL592148.3-201ENST00000608771 2646 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.28-201ENST00000362554 111 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RN7SKP224-201ENST00000364140 325 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-1318P-201ENST00000365389 103 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-1029P-201ENST00000384109 107 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC069218.2-201ENST00000411665 344 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC005517.2-201ENST00000424673 553 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RPS27AP12-201ENST00000429552 465 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC021382.1-201ENST00000483523 359 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC091167.1-201ENST00000492017 396 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC020893.1-201ENST00000502452 580 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC116562.3-201ENST00000506136 177 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC092436.1-201ENST00000506450 503 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 SMURF2P1-201ENST00000514992 481 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-347P-201ENST00000516658 105 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AP001804.3-201ENST00000525146 880 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC068587.5-201ENST00000528506 175 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AL049839.1-201ENST00000556151 657 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 MIR3158-1-201ENST00000583596 81 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AL356218.2-201ENST00000605264 187 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AL121932.1-201ENST00000605542 214 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC011373.1-201ENST00000607270 237 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 RMST_9.1-201ENST00000619945 193 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 AC015908.5-201ENST00000623289 343 ntBASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNGAP1Q96PV0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SYNGAP1Q96PV0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNGAP1Q96PV0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SYNGAP1Q96PV0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 HSPE1P11-201ENST00000339579 310 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 Y_RNA.22-201ENST00000362492 102 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 Y_RNA.395-201ENST00000383945 109 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 RNU6-505P-201ENST00000384427 107 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 MIR558-201ENST00000384920 94 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AL590762.2-201ENST00000395798 571 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AL645608.4-201ENST00000423619 154 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AC005019.1-201ENST00000436455 431 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 FTH1P1-201ENST00000437933 532 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 RPS26P56-201ENST00000444468 240 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 BTF3P15-201ENST00000455606 336 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 Y_RNA.653-201ENST00000459091 95 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 RNU1-6P-201ENST00000516290 144 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 RNU6-1088P-201ENST00000516850 104 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AP003122.3-201ENST00000526316 255 ntBASIC5.46□□□□□ -1.54
SYNGAP1Q96PV0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms