Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MUPP-201ENST00000438111 566 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 GSTA11P-201ENST00000452866 669 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.8□□□□□ -2.12
CFAP54Q96N23 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.8□□□□□ -2.12
CFAP54Q96N23 AC105429.2-201ENST00000610567 517 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.8□□□□□ -2.12
CFAP54Q96N23 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.8□□□□□ -2.12
CFAP54Q96N23 AL121821.2-201ENST00000556081 394 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 AC002546.1-201ENST00000588041 2504 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CFAP54Q96N23 BNIP3P2-201ENST00000441221 577 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.8□□□□□ -2.12
CFAP54Q96N23 AL137100.2-201ENST00000555786 315 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 MIR4421-201ENST00000578133 69 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 AL353748.2-201ENST00000622148 471 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CFAP54Q96N23 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CFAP54Q96N23 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.79□□□□□ -2.12
CFAP54Q96N23 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 TPMTP1-201ENST00000592307 737 ntBASIC1.79□□□□□ -2.12
CFAP54Q96N23 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 PWAR6-201ENST00000552334 4618 ntBASIC1.79□□□□□ -2.12
CFAP54Q96N23 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.79□□□□□ -2.12
CFAP54Q96N23 DEFA7P-201ENST00000382676 285 ntBASIC1.79□□□□□ -2.12
CFAP54Q96N23 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 RN7SL793P-201ENST00000583259 296 ntBASIC1.79□□□□□ -2.12
CFAP54Q96N23 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CFAP54Q96N23 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CFAP54Q96N23 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CFAP54Q96N23 CKAP2P1-201ENST00000555477 2049 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC006023.2-201ENST00000609916 167 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
CFAP54Q96N23 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CFAP54Q96N23 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CFAP54Q96N23 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC092447.7-201ENST00000422212 1621 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CFAP54Q96N23 RNU1-93P-201ENST00000364704 169 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC027124.2-201ENST00000428249 105 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC244505.5-201ENST00000443639 207 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 PTP4A1P6-201ENST00000531034 478 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 GLYCAM1-201ENST00000546596 285 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.78□□□□□ -2.12
CFAP54Q96N23 AL389895.1-201ENST00000554127 252 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 NF1P5-201ENST00000588287 448 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.78□□□□□ -2.12
CFAP54Q96N23 ZNF720P1-201ENST00000562403 1939 ntBASIC1.78□□□□□ -2.12
CFAP54Q96N23 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.78□□□□□ -2.13
CFAP54Q96N23 RNA5SP457-201ENST00000363657 124 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 POLHP1-201ENST00000411806 470 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 USP9YP8-201ENST00000441913 500 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 RNA5SP337-201ENST00000517007 109 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 AL356575.1-201ENST00000603008 283 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 MIR98-201ENST00000606724 119 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 SNORA51.12-201ENST00000384448 134 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CFAP54Q96N23 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 AC010680.1-201ENST00000590024 3590 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 HSPD1P16-201ENST00000402302 394 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 RNU2-58P-201ENST00000516403 183 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
CFAP54Q96N23 AC245036.5-201ENST00000596330 847 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 AC006254.3-201ENST00000603353 884 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 AL645939.4-201ENST00000604495 135 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 AC024560.3-201ENST00000608482 349 ntBASIC1.77□□□□□ -2.13
CFAP54Q96N23 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 Z98749.2-208ENST00000381646 500 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 AL022400.1-201ENST00000423946 935 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
CFAP54Q96N23 AC103987.3-201ENST00000582071 292 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 AL139286.1-201ENST00000604465 483 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CFAP54Q96N23 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 RNU6-249P-201ENST00000363016 102 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 RNA5SP139-201ENST00000364340 117 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CFAP54Q96N23 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms