Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AP000907.2-201ENST00000530827 353 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 OR5AL2P-201ENST00000532185 920 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC015917.1-201ENST00000579654 510 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC023575.1-201ENST00000580510 358 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RPL7P26-201ENST00000333817 754 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 Y_RNA.356-201ENST00000365475 113 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RHOT1P2-201ENST00000366423 333 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RNU6-116P-201ENST00000384042 109 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RNU6-74P-201ENST00000384235 107 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 MIR1-2-201ENST00000384961 85 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AL354719.1-201ENST00000406535 843 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC007390.1-201ENST00000415722 356 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC127526.1-201ENST00000417526 366 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RPL36AP53-201ENST00000432891 316 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 GPR143P-201ENST00000434155 205 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC119618.1-201ENST00000434191 222 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC108734.1-201ENST00000439549 399 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC114495.1-201ENST00000441274 436 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC239809.1-201ENST00000450470 217 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC104308.1-201ENST00000454621 333 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RPL23AP41-201ENST00000484754 458 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 PCBP2P3-201ENST00000509726 843 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 RNA5SP401-201ENST00000515920 127 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC024224.1-201ENST00000538284 609 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC092470.1-201ENST00000546187 132 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC069240.1-201ENST00000548774 375 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 HMGB1P6-201ENST00000569046 646 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 MIR4715-201ENST00000584117 79 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AP001429.1-201ENST00000602568 530 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC115621.1-201ENST00000604653 858 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC023043.4-201ENST00000612081 449 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 MIR6716-201ENST00000613413 80 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC019278.1-201ENST00000623516 479 ntBASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHAMP1Q96JM3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 Y_RNA.333-201ENST00000365274 102 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 RNU6-767P-201ENST00000384132 107 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 Z98745.1-201ENST00000402553 494 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 RNU2-9P-201ENST00000410194 145 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 RN7SKP235-201ENST00000410662 305 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 EEF1A1P40-201ENST00000412883 573 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 RPS23P10-201ENST00000416185 486 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 OR4F13P-201ENST00000428478 931 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 FTH1P25-201ENST00000447665 469 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 RPL7P52-201ENST00000449200 742 ntBASIC5.02□□□□□ -1.61
CHAMP1Q96JM3 CACYBPP2-201ENST00000453625 678 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms