Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU6-1148P-201ENST00000410992 104 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 RN7SKP140-201ENST00000411196 284 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC092745.2-202ENST00000411880 369 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AL356095.1-201ENST00000417217 199 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC234782.4-201ENST00000417646 1048 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 MTCYBP8-201ENST00000422855 651 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 BMS1P19-201ENST00000433925 393 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC236972.2-201ENST00000434979 310 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC114495.1-201ENST00000441274 436 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 HMGB1P21-201ENST00000502313 581 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 RNU6-835P-201ENST00000516974 104 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AP003467.2-201ENST00000520175 319 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC018630.1-201ENST00000541376 925 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC025260.1-201ENST00000548858 430 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC055876.1-202ENST00000567053 138 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 MIR3149-201ENST00000584629 83 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AL109918.3-201ENST00000603072 338 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AL354984.3-201ENST00000604803 325 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC016925.2-201ENST00000605108 242 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC019193.3-201ENST00000609144 554 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 MIR6867-201ENST00000610636 67 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC005332.6-201ENST00000613178 446 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC009248.2-201ENST00000619826 254 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 MIR8059-201ENST00000620427 81 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AL445363.3-201ENST00000623080 671 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 AC138649.5-201ENST00000637456 137 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 MKKS-204ENST00000639674 192 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHFRQ96EP1 MFSD8-242ENST00000641690 4199 ntBASIC4.5□□□□□ -1.69
CHFRQ96EP1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
CHFRQ96EP1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNU6-462P-201ENST00000362659 105 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNU6-1322P-201ENST00000364309 107 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNU6-619P-201ENST00000365146 108 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNA5SP283-201ENST00000365604 119 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNU6-74P-201ENST00000384235 107 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 CYCSP10-201ENST00000417973 294 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 RPL31P35-201ENST00000431058 377 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AL132765.1-201ENST00000434165 553 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 GTF2IP13-201ENST00000438487 386 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 SEPT14P3-201ENST00000439401 183 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 HSFY6P-201ENST00000445573 403 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AL732372.2-207ENST00000445840 183 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 SUMO1P2-201ENST00000452524 304 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 SEPT14P2-201ENST00000453405 183 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 SNRPGP5-201ENST00000456003 220 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 MTCO2P29-201ENST00000465212 189 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 FTH1P24-201ENST00000503502 462 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 SEPT14P4-201ENST00000513445 186 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 RNA5SP49-201ENST00000516450 115 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC107953.1-201ENST00000522216 297 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 FO082796.1-201ENST00000523795 183 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 PHBP17-201ENST00000528576 541 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC023050.3-201ENST00000541142 333 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 OR8R1P-201ENST00000543943 764 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 TVP23BP1-201ENST00000557500 617 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC034105.3-201ENST00000565294 442 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms