Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 RN7SKP46-201ENST00000515942 234 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 RNU4-60P-201ENST00000517239 135 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AP000907.2-201ENST00000530827 353 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC060771.1-201ENST00000582031 164 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 HMGN1P30-201ENST00000589286 268 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 CKS1BP3-201ENST00000600888 237 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC011451.2-201ENST00000604303 598 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC121334.2-201ENST00000605387 271 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC108747.1-201ENST00000609508 535 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 MTND5P3-201ENST00000438536 1800 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC011460.1-201ENST00000636268 1834 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 MAPK10-303ENST00000641324 3959 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 PRO1804-201ENST00000623780 2050 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC012020.1-201ENST00000624541 1728 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 GNG5P1-201ENST00000255500 204 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 Y_RNA.6-201ENST00000362350 114 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 RNA5SP502-201ENST00000362694 119 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 RPS3AP36-201ENST00000398190 775 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 RBMY1KP-201ENST00000423480 476 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 ARPC3P1-201ENST00000437218 533 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 RPL36AP13-201ENST00000457490 317 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 MTND1P3-201ENST00000484956 952 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 RPL37P25-201ENST00000507308 276 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 HMGN1P11-201ENST00000508668 303 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 Y_RNA.672-201ENST00000516289 104 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 RNU6-430P-201ENST00000517078 107 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC063950.1-201ENST00000552036 308 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 MIR3913-1-201ENST00000577744 102 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 NRBF2P1-201ENST00000587407 859 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC068790.3-201ENST00000602988 553 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 MIR432-201ENST00000606207 94 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 PISRT1-201ENST00000626175 531 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 MIR3651-201ENST00000630427 90 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AC099654.12-201ENST00000639868 649 ntBASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TRIM43Q96BQ3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC009902.3-201ENST00000606235 2172 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 Y_RNA.41-201ENST00000362646 102 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RNA5SP399-201ENST00000364003 117 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RNA5SP97-201ENST00000365006 84 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 U3.15-201ENST00000365398 212 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RNU2-8P-201ENST00000410727 190 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC078974.1-201ENST00000411597 223 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AL591419.1-201ENST00000427423 339 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 GAPDHP17-201ENST00000449858 1001 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms