Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 HSPA8P1-201ENST00000425843 1833 ntBASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3KBP1Q96B97 AL390237.1-201ENST00000404226 1415 ntBASIC3.96□□□□□ -1.77
SH3KBP1Q96B97 AF117829.1-206ENST00000621883 3802 ntBASIC3.96□□□□□ -1.77
SH3KBP1Q96B97 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SH3KBP1Q96B97 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RPL7P26-201ENST00000333817 754 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RPL17P12-201ENST00000413391 526 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AL356583.2-201ENST00000426536 280 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AL691449.1-201ENST00000426570 421 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC096638.2-201ENST00000434965 711 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 MTCO1P19-201ENST00000443487 500 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AL590365.1-201ENST00000450788 243 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RNU6-956P-201ENST00000458868 103 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RPL21P129-201ENST00000491732 478 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC004069.2-201ENST00000505438 1114 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 FTH1P21-201ENST00000512179 511 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC091516.1-201ENST00000549191 703 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 MIR5697-201ENST00000578045 78 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 MTND4P4-201ENST00000439033 1366 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 AC092447.10-201ENST00000620607 1652 ntBASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SH3KBP1Q96B97 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 FRG1BP-201ENST00000278882 761 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 Y_RNA.553-201ENST00000384670 102 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 RNU6-114P-201ENST00000384704 105 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 RN7SKP202-201ENST00000410439 330 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AL359704.1-201ENST00000411586 781 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC099677.1-201ENST00000420575 175 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC079780.1-201ENST00000428259 207 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 ARF4P2-201ENST00000430209 526 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 OR4K11P-201ENST00000431829 904 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 RPL22P17-201ENST00000438729 315 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 MTND1P29-201ENST00000448112 647 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 DNAJC19P1-201ENST00000455312 319 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AL136097.1-201ENST00000456945 913 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 SNORA84-201ENST00000459229 133 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 RPL7L1P8-201ENST00000469911 741 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC021382.1-201ENST00000483523 359 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 VN1R105P-201ENST00000486595 910 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC004062.1-201ENST00000509926 645 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 RN7SKP13-201ENST00000515933 244 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AC004223.2-201ENST00000590309 544 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AL390240.1-201ENST00000612950 384 ntBASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.95□□□□□ -1.78
SH3KBP1Q96B97 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms