Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC034229.4-201ENST00000607861 441 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC024941.1-201ENST00000612250 334 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL138880.2-201ENST00000616214 239 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC021755.4-201ENST00000616620 456 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL607023.1-201ENST00000620045 248 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL732618.1-201ENST00000623251 301 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 DDX10P1-201ENST00000448545 1933 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC012321.1-201ENST00000561622 1588 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC021755.1-201ENST00000559747 1447 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC011460.1-201ENST00000636268 1834 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 RPL32P3-201ENST00000359025 275 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 RPL7P60-201ENST00000397636 735 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC017079.2-201ENST00000416102 485 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AL590383.1-201ENST00000428602 75 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 RPL35AP22-201ENST00000436855 335 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AL591719.1-201ENST00000444669 744 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AL606662.1-201ENST00000445763 553 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 RPL31P60-201ENST00000478450 367 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 RN7SKP287-201ENST00000516546 266 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 SNORD59.2-201ENST00000516873 68 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC087499.8-201ENST00000578406 226 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC006116.10-201ENST00000591836 581 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC006539.2-201ENST00000601729 572 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC006077.1-201ENST00000604746 343 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 AC058791.1-201ENST00000608412 3198 ntBASIC3.45□□□□□ -1.86
VPS33AQ96AX1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-1200P-201ENST00000384162 107 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-253P-201ENST00000384730 105 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AL590084.2-201ENST00000401481 382 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNA5SP38-201ENST00000410750 119 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-55P-201ENST00000411092 107 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-954P-201ENST00000411355 107 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-516P-201ENST00000411381 104 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AL139247.1-201ENST00000422768 325 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 OR8F1P-201ENST00000425243 930 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 MTCYBP3-201ENST00000445588 1137 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RPS4XP22-201ENST00000480755 780 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RPL30P5-201ENST00000494923 336 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 SNORA3.4-201ENST00000515969 96 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 ISCA1P3-201ENST00000577104 373 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AC093424.1-201ENST00000604999 338 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AC097468.3-201ENST00000607956 456 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AL603758.1-201ENST00000618654 241 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
VPS33AQ96AX1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VPS33AQ96AX1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 MIR30E-201ENST00000362104 92 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms