Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 BX248123.2-201ENST00000606318 124 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 AC007620.3-201ENST00000608131 497 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 AC004943.3-201ENST00000624116 600 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 AC027514.1-201ENST00000588561 1603 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 AC110792.3-201ENST00000595906 1614 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.05□□□□□ -1.92
TOPBP1Q92547 AP001486.2-201ENST00000561652 5113 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 AC010329.2-201ENST00000595195 2737 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 U3.37-201ENST00000408528 213 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.04□□□□□ -1.92
TOPBP1Q92547 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.04□□□□□ -1.92
TOPBP1Q92547 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.04□□□□□ -1.92
TOPBP1Q92547 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.04□□□□□ -1.92
TOPBP1Q92547 OR5D17P-201ENST00000531492 978 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 CBX3P4-201ENST00000538909 354 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 AC068714.1-201ENST00000559623 800 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 AC009314.1-201ENST00000603871 304 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 AC019131.2-201ENST00000609071 870 ntBASIC3.04□□□□□ -1.92
TOPBP1Q92547 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
TOPBP1Q92547 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.04□□□□□ -1.92
TOPBP1Q92547 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TOPBP1Q92547 RNU6-582P-201ENST00000362989 107 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 RNA5SP160-201ENST00000364866 120 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TOPBP1Q92547 EIF1AXP1-201ENST00000419267 435 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 HMGB1P27-201ENST00000431429 603 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 RPL34P26-201ENST00000445636 354 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 BX322784.1-201ENST00000455793 1077 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC092798.1-201ENST00000458542 409 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 AL035411.2-201ENST00000604022 421 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC034236.3-201ENST00000605999 461 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 uc_338.5-201ENST00000611839 155 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC009318.3-201ENST00000616916 503 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TOPBP1Q92547 RNU6-225P-201ENST00000384613 103 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 RPL23AP7-203ENST00000449021 469 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TOPBP1Q92547 IGLV3-17-201ENST00000519099 244 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 AL356575.1-201ENST00000603008 283 ntBASIC3.03□□□□□ -1.92
TOPBP1Q92547 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.03□□□□□ -1.92
TOPBP1Q92547 SEPT7P7-201ENST00000420492 1301 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.02□□□□□ -1.93
TOPBP1Q92547 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TOPBP1Q92547 RNU4-74P-201ENST00000411280 161 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 AC004965.1-201ENST00000413033 213 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.02□□□□□ -1.93
TOPBP1Q92547 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
TOPBP1Q92547 AL138799.3-201ENST00000438968 350 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.02□□□□□ -1.93
TOPBP1Q92547 RNA5SP309-201ENST00000516670 106 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 VIS1.1-201ENST00000610517 203 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 C2orf27A-204ENST00000623058 969 ntBASIC3.02□□□□□ -1.93
TOPBP1Q92547 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.02□□□□□ -1.93
TOPBP1Q92547 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TOPBP1Q92547 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 Y_RNA.224-201ENST00000364308 111 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 MT-TP-201ENST00000387461 68 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AL034374.1-201ENST00000406329 351 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC007390.1-201ENST00000415722 356 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC073464.3-201ENST00000422564 712 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC004486.1-201ENST00000546846 233 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 WISP1-OT1-201ENST00000602893 642 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC012531.5-201ENST00000611375 151 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AL353748.2-201ENST00000622148 471 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC145207.9-201ENST00000623802 325 ntBASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.01□□□□□ -1.93
TOPBP1Q92547 AC103988.1-201ENST00000566382 2177 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TOPBP1Q92547 USP9YP6-201ENST00000413550 854 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 MTCO3P21-201ENST00000430791 643 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 USP9YP34-201ENST00000453983 808 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3□□□□□ -1.93
TOPBP1Q92547 RNU6-1218P-201ENST00000458990 108 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3□□□□□ -1.93
TOPBP1Q92547 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3□□□□□ -1.93
TOPBP1Q92547 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3□□□□□ -1.93
TOPBP1Q92547 AC083899.3-201ENST00000603413 594 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 AL133370.2-201ENST00000619934 439 ntBASIC3□□□□□ -1.93
TOPBP1Q92547 CFTRP2-201ENST00000634304 199 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms