Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC092447.10-201ENST00000620607 1652 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AL161781.1-201ENST00000354277 403 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 Y_RNA.493-201ENST00000384422 102 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 RPL17P12-201ENST00000413391 526 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 MTCO3P5-201ENST00000433620 714 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 MRPS18BP2-201ENST00000434310 759 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 MTCO2P7-201ENST00000446518 666 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AP000542.1-201ENST00000448473 371 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 RNA5SP269-201ENST00000459032 137 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC034159.1-201ENST00000513885 583 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC107954.1-201ENST00000565906 727 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC090615.1-201ENST00000577519 154 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 MIR4307-201ENST00000582802 84 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC007687.1-201ENST00000602704 304 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC112230.1-201ENST00000604342 547 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC006329.2-201ENST00000611491 394 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC008121.2-201ENST00000614647 523 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 U73479.1-201ENST00000618062 168 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC025048.6-202ENST00000627667 438 ntBASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A1Q8WWI5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNY4P24-201ENST00000362735 96 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNA5SP258-201ENST00000362750 119 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNA5SP167-201ENST00000365461 116 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-744P-201ENST00000365557 107 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-1316P-201ENST00000384242 108 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 U8.14-201ENST00000390843 143 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-55P-201ENST00000411092 107 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RN7SKP142-201ENST00000411236 328 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-954P-201ENST00000411355 107 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 MTCO1P17-201ENST00000411522 491 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC109780.2-201ENST00000413467 845 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RPS7P13-201ENST00000413955 498 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL445669.1-201ENST00000426743 755 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL591419.1-201ENST00000427423 339 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 COX6CP12-201ENST00000446748 202 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC010655.1-201ENST00000449336 292 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 SNRPGP9-201ENST00000456025 225 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 OR6K1P-201ENST00000456766 971 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RN7SL132P-201ENST00000478131 296 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AP000797.1-201ENST00000478870 387 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 HMGB1P36-201ENST00000487709 576 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC020893.1-201ENST00000502452 580 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC091435.1-201ENST00000505442 584 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC010424.1-201ENST00000506336 297 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 MTND4P2-201ENST00000507767 1203 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 NPM1P41-201ENST00000512920 831 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-27P-201ENST00000516146 107 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC023632.4-201ENST00000517783 191 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RPL12P22-201ENST00000519073 490 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 OR4R3P-201ENST00000525084 838 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC024224.1-201ENST00000538284 609 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms