Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC017104.5-201ENST00000637647 639 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 RNU6-1339P-201ENST00000363574 91 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 ATP5F1P6-201ENST00000402768 767 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AL513175.2-201ENST00000422071 443 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 MTCO2P17-201ENST00000424336 677 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC006548.1-201ENST00000427470 102 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 UBE2V1P5-201ENST00000440070 405 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC004865.1-201ENST00000442276 1003 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 RNFT1P2-201ENST00000443064 757 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AL445669.2-201ENST00000454425 421 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC104057.1-201ENST00000515547 497 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC104986.1-201ENST00000517978 436 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AL669831.4-202ENST00000590817 238 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC023043.3-201ENST00000593113 385 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC078899.3-201ENST00000599065 212 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC113368.1-201ENST00000603736 382 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 OR4H6P-202ENST00000603819 340 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC091046.2-201ENST00000620775 665 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC090617.7-201ENST00000623952 126 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AC097372.4-201ENST00000625025 466 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 CR381572.1-201ENST00000625098 102 ntBASIC2.36□□□□□ -2.03
LMX1AQ8TE12 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1AQ8TE12 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 SNORD21-201ENST00000383953 95 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RNU6-1151P-201ENST00000384684 107 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 UBE2V1P11-201ENST00000411559 285 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC007064.1-201ENST00000412238 351 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RAD23BP2-201ENST00000416003 1207 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RPL21P32-201ENST00000419877 477 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC093422.3-201ENST00000428506 305 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 SAR1AP4-201ENST00000429225 591 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC104332.2-201ENST00000429959 156 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RAB11AP1-201ENST00000442978 646 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC104472.2-201ENST00000469035 601 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 OR52A4P-202ENST00000481634 799 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RN7SL297P-201ENST00000483161 293 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RPS27P23-201ENST00000487608 251 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 RNU6-826P-201ENST00000516827 104 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 IGKV2D-36-201ENST00000518643 226 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AP003122.6-201ENST00000623831 495 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC090897.3-201ENST00000636973 1157 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC069528.2-201ENST00000624849 1991 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC092447.7-201ENST00000422212 1621 ntBASIC2.35□□□□□ -2.03
LMX1AQ8TE12 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LMX1AQ8TE12 AC016716.1-201ENST00000265882 708 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL589826.1-201ENST00000340697 249 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 SNORD56.4-201ENST00000363883 71 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 RNU1-73P-201ENST00000383971 164 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL162578.1-201ENST00000406202 378 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 RPL7P10-201ENST00000417407 739 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 VN1R42P-201ENST00000424651 344 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 UBE2V1P6-201ENST00000430840 422 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL139415.2-201ENST00000431968 163 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC098826.1-201ENST00000433943 471 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 FAM103A2P-201ENST00000444122 354 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 snoU13.26-201ENST00000459452 105 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC010301.1-201ENST00000473936 355 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms