Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.152-201ENST00000363578 100 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 U3.11-201ENST00000364476 212 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-641P-201ENST00000384006 107 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-398P-201ENST00000384143 109 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.461-201ENST00000384263 103 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 HMGB3P7-201ENST00000400214 611 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 MIR548I2-201ENST00000408348 149 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 RNA5SP113-201ENST00000410486 84 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC016397.1-201ENST00000412463 242 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AL359265.2-201ENST00000434367 631 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 TPT1P13-201ENST00000449760 499 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 RN7SL459P-201ENST00000481078 302 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.670-201ENST00000516255 105 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.708-201ENST00000516950 96 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC011979.2-201ENST00000527568 352 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 DEFB109D-201ENST00000529497 240 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 CYCSP28-201ENST00000534284 321 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC091042.1-201ENST00000579213 173 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC060771.1-201ENST00000582031 164 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC125232.2-201ENST00000592457 143 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC078899.3-201ENST00000599065 212 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC008745.1-201ENST00000604064 271 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 MIR6128-201ENST00000615528 109 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 AC073869.10-201ENST00000642016 354 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.106-201ENST00000363189 100 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.210-201ENST00000364161 110 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RNA5SP505-201ENST00000364748 108 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-1207P-201ENST00000384343 107 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.485-201ENST00000384395 102 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RPL21P91-201ENST00000429231 479 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC009238.2-201ENST00000431026 355 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 MTND5P15-201ENST00000434246 349 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RPL21P2-201ENST00000440049 481 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AL031584.1-201ENST00000447169 754 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AL590664.1-201ENST00000448065 339 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC073264.2-201ENST00000448886 166 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RBMY2TP-201ENST00000451162 947 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 HMGB1P4-201ENST00000455362 567 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC103987.1-201ENST00000473394 348 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RPL21P93-201ENST00000480465 489 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 CEACAMP10-202ENST00000495431 496 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 HIGD1AP13-201ENST00000509878 289 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 FTH1P21-201ENST00000512179 511 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-138P-201ENST00000515952 107 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 OR4P1P-201ENST00000530808 1136 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 MIR3910-1-201ENST00000580936 111 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AL391358.1-201ENST00000605342 190 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC245517.5-201ENST00000611529 162 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 MIR6780A-201ENST00000615089 68 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 uc_338.9-201ENST00000617424 182 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 SAMMSON-226ENST00000642089 1582 ntBASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 AC022031.1-201ENST00000585985 2593 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms