Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 MIR3651-201ENST00000630427 90 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 CCT4P2-201ENST00000233836 1548 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 TAB3P1-202ENST00000452645 1634 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC080128.1-201ENST00000474389 1917 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC010329.5-201ENST00000623497 2174 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC008568.2-201ENST00000623862 2313 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 FCF1P2-201ENST00000415284 583 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 USP9YP20-201ENST00000419224 558 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL445685.2-201ENST00000422551 342 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 RPL31P63-201ENST00000422565 375 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 BRWD1P3-201ENST00000428816 390 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC018644.1-201ENST00000429934 551 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC092573.2-201ENST00000434546 243 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC016691.1-201ENST00000441321 413 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 RPS3AP12-201ENST00000443616 753 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC233982.1-201ENST00000451247 436 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC008280.2-201ENST00000455473 307 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 TRBV26-201ENST00000456572 344 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 RNA5SP24-201ENST00000516478 95 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 OR4R2P-201ENST00000530815 597 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 OR11H5P-201ENST00000554039 926 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC040174.2-201ENST00000602701 465 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC025165.5-201ENST00000602802 578 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC120053.1-201ENST00000607706 736 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AC005962.2-201ENST00000611427 652 ntBASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SPTSSBQ8NFR3 AP006437.1-201ENST00000641440 3685 ntBASIC1.28□□□□□ -2.21
SPTSSBQ8NFR3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 MTND4P27-201ENST00000450813 1354 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC109315.1-201ENST00000584143 1347 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 RNU6-173P-201ENST00000364215 104 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 SNORA5A-201ENST00000384111 134 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 UBA52P6-201ENST00000399822 382 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AL445584.1-201ENST00000431451 330 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 BTF3P5-201ENST00000457252 467 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 RNU6-420P-201ENST00000458780 107 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 MTCO2P9-201ENST00000503214 694 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 HMGB3P17-201ENST00000504195 649 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 PCNAP1-201ENST00000505363 709 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AP003467.2-201ENST00000520175 319 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC008676.3-201ENST00000521237 435 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC010306.1-201ENST00000523223 1117 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 ARL6IP1P1-201ENST00000545836 610 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC068135.2-201ENST00000569293 1028 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms