Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIMC1Q8NDZ2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.33□□□□□ -1.72
SIMC1Q8NDZ2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIMC1Q8NDZ2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIMC1Q8NDZ2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.33□□□□□ -1.72
SIMC1Q8NDZ2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-28P-201ENST00000362378 107 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU4-79P-201ENST00000362764 141 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.72-201ENST00000362894 103 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-263P-201ENST00000363811 107 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-289P-201ENST00000364093 107 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-282P-201ENST00000365357 103 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.481-201ENST00000384373 102 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MIR659-201ENST00000384963 97 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL590004.1-201ENST00000405321 300 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MTCO3P12-201ENST00000416718 547 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL391219.1-201ENST00000422570 483 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC133104.1-201ENST00000429100 218 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC005534.2-201ENST00000431047 433 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 KCTD9P3-201ENST00000434597 1169 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL451050.1-201ENST00000450126 415 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MTND1P12-201ENST00000455231 147 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-420P-201ENST00000458780 107 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 snoU13.1-201ENST00000459157 104 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RPS20P20-201ENST00000460498 340 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC114967.1-201ENST00000504890 259 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC093853.1-201ENST00000515689 483 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-27P-201ENST00000516146 107 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.672-201ENST00000516289 104 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-445P-201ENST00000516949 107 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC024224.1-201ENST00000538284 609 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 BNIP3P5-201ENST00000562290 498 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC010928.3-201ENST00000587712 541 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AL136363.1-201ENST00000605349 337 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.812-201ENST00000610788 101 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.784-201ENST00000613803 101 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.787-201ENST00000616522 101 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.780-201ENST00000617336 101 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.801-201ENST00000619005 101 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 C2orf27A-204ENST00000623058 969 ntBASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.32□□□□□ -1.72
SIMC1Q8NDZ2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC244517.1-201ENST00000606030 2086 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 OR11H5P-202ENST00000641612 1325 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 FRG1BP-201ENST00000278882 761 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC021146.4-201ENST00000309229 279 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 FRG1CP-201ENST00000358464 769 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-845P-201ENST00000362578 103 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-989P-201ENST00000362756 107 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-335P-201ENST00000364563 113 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC068538.1-201ENST00000376856 336 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-767P-201ENST00000384132 107 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 MIR298-201ENST00000401212 88 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 DHFRP6-201ENST00000401776 268 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RPS7P15-201ENST00000415804 584 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 MTND3P17-201ENST00000416968 344 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 BTF3L4P3-201ENST00000418879 476 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL732292.1-201ENST00000426692 226 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL590233.1-201ENST00000430017 456 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 GTF2IP20-201ENST00000431663 360 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RPL21P112-201ENST00000434403 463 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RPL7P54-201ENST00000438336 674 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RPL22P17-201ENST00000438729 315 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms