Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNE4Q8N205 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNE4Q8N205 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNE4Q8N205 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 Y_RNA.295-201ENST00000364918 102 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNE4Q8N205 MIR490-201ENST00000384865 128 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 Y_RNA.598-201ENST00000410480 95 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 RPS3AP3-201ENST00000411933 242 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 RPS3AP9-201ENST00000417027 792 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 BX295541.1-201ENST00000417774 250 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC099336.2-201ENST00000422457 254 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AL391219.1-201ENST00000422570 483 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 MTND5P14-201ENST00000441481 1267 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 GAPDHP17-201ENST00000449858 1001 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 TRGVB-201ENST00000453257 471 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC099560.2-201ENST00000457554 255 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 RPS29P25-201ENST00000481709 171 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC027309.2-201ENST00000520566 192 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 OR5AP1P-201ENST00000529730 940 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC060780.3-201ENST00000589464 80 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC112191.3-201ENST00000604371 277 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 AC012603.1-201ENST00000606424 528 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 FER-210ENST00000628534 558 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 MIR3651-201ENST00000630427 90 ntBASIC4.74□□□□□ -1.65
SYNE4Q8N205 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNE4Q8N205 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNE4Q8N205 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SYNE4Q8N205 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNE4Q8N205 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 DCAF13P1-201ENST00000495256 1330 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC074029.4-201ENST00000624796 1859 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 Y_RNA.160-201ENST00000363677 92 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 RNA5SP267-201ENST00000364893 126 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 RNU6-809P-201ENST00000384461 107 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 RNU6-1009P-201ENST00000390996 107 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 GSTA9P-201ENST00000406231 611 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC233981.1-201ENST00000423224 461 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 USP9YP36-201ENST00000424581 829 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 RPL37P21-201ENST00000435890 276 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 YWHAZP8-201ENST00000436935 731 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC017037.1-201ENST00000508460 471 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC105914.1-201ENST00000511798 226 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AP001893.2-201ENST00000526949 202 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 FAM92A1P1-201ENST00000528023 890 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC013828.2-201ENST00000532487 235 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 HMGB1P33-201ENST00000563485 527 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 UBE2V2P2-201ENST00000587677 504 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC123786.2-201ENST00000603459 275 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC008277.2-201ENST00000605196 797 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC007038.2-201ENST00000608095 740 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AP001506.1-201ENST00000615444 211 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 AC112487.2-201ENST00000637950 304 ntBASIC4.73□□□□□ -1.65
SYNE4Q8N205 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
SYNE4Q8N205 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNE4Q8N205 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 RNU6-657P-201ENST00000383904 107 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 RNU6-116P-201ENST00000384042 109 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 RNU4-55P-201ENST00000410731 137 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 EEF1A1P40-201ENST00000412883 573 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms