Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GMPSP1-201ENST00000514075 579 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 RNU6-390P-201ENST00000516259 103 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 MTCO2P4-201ENST00000517968 247 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AC009063.1-201ENST00000563342 702 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 BNIP3P33-201ENST00000598912 569 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AL161729.4-201ENST00000604650 476 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AC006023.2-201ENST00000609916 167 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 RN7SL722P-201ENST00000617780 284 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 uc_338.13-201ENST00000618243 179 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 RN7SL565P-201ENST00000618246 284 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 RMST_9.1-201ENST00000619945 193 ntBASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT78Q8N1N4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC067945.1-201ENST00000342609 618 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RNU1-15P-201ENST00000353977 144 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RNU6-50P-201ENST00000362356 103 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 Y_RNA.88-201ENST00000363029 99 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RNA5SP175-201ENST00000364275 119 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 SNORA23-201ENST00000365128 182 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RN7SKP167-201ENST00000411047 285 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RPL37P18-201ENST00000411602 243 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RBMY1KP-201ENST00000423480 476 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC104651.1-201ENST00000427559 735 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC104850.1-201ENST00000435940 476 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC008481.1-201ENST00000463278 396 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RPL21P104-201ENST00000464143 478 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RBM43P1-201ENST00000476891 1081 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC108860.1-201ENST00000484521 383 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC068305.1-201ENST00000497406 726 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RNA5SP337-201ENST00000517007 109 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 ERHP1-201ENST00000523006 310 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC008489.1-201ENST00000524271 483 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 PHBP17-201ENST00000528576 541 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC012417.1-201ENST00000582307 1039 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC234771.5-201ENST00000600161 514 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AL606834.2-201ENST00000602954 668 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AL021997.2-201ENST00000615674 271 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC004825.2-201ENST00000616634 455 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AC138649.3-201ENST00000622154 254 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AL136313.1-201ENST00000624804 202 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 USP8P1-201ENST00000494673 3183 ntBASIC4.2□□□□□ -1.74
KRT78Q8N1N4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT78Q8N1N4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.19□□□□□ -1.74
KRT78Q8N1N4 RNU5A-1-201ENST00000362698 116 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 Y_RNA.248-201ENST00000364501 109 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 RNU6-76P-201ENST00000384060 104 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 RPL7P60-201ENST00000397636 735 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 TXNP7-201ENST00000406296 293 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 SNORA11F-201ENST00000408237 128 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
KRT78Q8N1N4 PIGFP2-201ENST00000421400 651 ntBASIC4.19□□□□□ -1.74
KRT78Q8N1N4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms