Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 IGKV2-38-201ENST00000517443 247 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 IGKV2D-36-201ENST00000518643 226 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 SNRPGP16-201ENST00000533275 226 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC010186.2-204ENST00000537668 439 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL442163.3-201ENST00000554110 156 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC107958.1-201ENST00000556576 290 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 MIR548AC-201ENST00000585049 88 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL359091.2-201ENST00000609303 556 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 MIR6806-201ENST00000622141 64 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL391684.1-202ENST00000641293 1636 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL596275.2-204ENST00000641628 552 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 Z95114.1-201ENST00000624264 14574 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC026523.2-201ENST00000625039 7739 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AL078621.3-201ENST00000623707 2042 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 MIR130B-202ENST00000385018 82 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 Y_RNA.602-201ENST00000410535 92 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 Y_RNA.626-201ENST00000411288 95 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC092447.6-201ENST00000414578 210 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 EI24P1-201ENST00000416584 867 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 PNKDP1-201ENST00000435914 430 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AL138899.2-201ENST00000439139 499 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 RPL12P11-201ENST00000439970 501 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AL589765.3-201ENST00000446084 462 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 ISCUP1-201ENST00000454451 448 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC009963.3-201ENST00000458090 486 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC091021.1-201ENST00000468051 388 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 RPL30P10-201ENST00000488148 337 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC009120.1-201ENST00000493458 473 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 TOMM22P4-201ENST00000511318 336 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 SNORA31.3-201ENST00000516029 96 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 RNU6-914P-201ENST00000516749 109 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 RN7SKP258-201ENST00000517151 304 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC022559.1-201ENST00000520905 205 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC007458.1-201ENST00000542812 373 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AL359219.2-201ENST00000555184 348 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC072026.1-201ENST00000605023 201 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC123912.5-201ENST00000605470 343 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC024884.1-201ENST00000620583 399 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 AC090740.1-201ENST00000623193 2262 ntBASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCDC116Q8IYX3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC239868.2-201ENST00000564237 4527 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC010329.2-201ENST00000595195 2737 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RPL9P7-201ENST00000330965 580 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RNU6-1020P-201ENST00000363684 107 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RNU6-47P-201ENST00000383866 107 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 MIR521-1-201ENST00000384902 87 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RPL35AP3-201ENST00000414680 288 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC017079.2-201ENST00000416102 485 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC099677.3-201ENST00000427081 395 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AC004938.1-201ENST00000438468 308 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 AL513043.1-201ENST00000439124 535 ntBASIC5.59□□□□□ -1.51
CCDC116Q8IYX3 RNU6-1037P-201ENST00000459571 107 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms