Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-712P-201ENST00000410558 100 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC092447.6-201ENST00000414578 210 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 RAD23BP2-201ENST00000416003 1207 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC245291.1-201ENST00000419501 328 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 NEK4P1-201ENST00000433383 879 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 HSPE1P28-201ENST00000443139 211 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 MTCO3P11-201ENST00000455103 774 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 SUMO2P2-201ENST00000456482 255 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC092451.1-201ENST00000480211 153 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 RPL31P13-201ENST00000484151 370 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AP001086.1-201ENST00000494882 321 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 SNORA31.20-201ENST00000517111 133 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 EEF1A1P37-201ENST00000522748 715 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC022861.1-201ENST00000522981 663 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 DEFB131D-201ENST00000526803 184 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC126177.3-201ENST00000551839 688 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC087465.1-201ENST00000560574 245 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC009097.3-201ENST00000563557 1018 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC012493.2-201ENST00000595083 291 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 VN1R78P-201ENST00000597393 564 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 VN1R82P-201ENST00000601481 356 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AL161756.2-201ENST00000604597 246 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC010738.1-201ENST00000604970 987 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 XIST_intron.1-201ENST00000619444 68 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC073476.4-201ENST00000628409 72 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AC008993.2-201ENST00000631744 806 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AL356473.1-201ENST00000406203 1408 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL049780.3-201ENST00000624612 1583 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AP000568.1-201ENST00000282964 442 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RNU6-600P-201ENST00000362524 99 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RNA5SP374-201ENST00000362939 125 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RNU6-1181P-201ENST00000384191 106 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RNA5SP107-201ENST00000411358 122 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 USP9YP33-201ENST00000412220 421 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 MTATP6P27-201ENST00000416987 621 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL512649.1-201ENST00000428997 581 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL590233.1-201ENST00000430017 456 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 USP9YP35-201ENST00000435696 412 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC009969.1-201ENST00000438726 172 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL591719.1-201ENST00000444669 744 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AP001992.1-205ENST00000462248 379 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC010285.1-201ENST00000470580 392 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RPL23AP55-201ENST00000498163 452 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC114967.1-201ENST00000504890 259 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 HMGB1P22-201ENST00000505315 124 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RNU1-143P-201ENST00000516296 146 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RN7SKP57-201ENST00000517248 293 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC109635.4-202ENST00000531666 412 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 DUXAP1-201ENST00000556632 463 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 CYCSP2-201ENST00000558168 301 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AC012182.1-201ENST00000570133 895 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 AL592221.1-201ENST00000605266 382 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 U1.23-201ENST00000610293 146 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 TUSC7.1-201ENST00000610969 165 ntBASIC2.93□□□□□ -1.94
C9orf40Q8IXQ3 RNU1-68P-201ENST00000615382 146 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms