Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 RAC1P6-201ENST00000423911 575 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC008065.1-201ENST00000428525 348 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 HMGB1P9-201ENST00000429856 646 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 RPS29P14-201ENST00000431518 171 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AL359265.2-201ENST00000434367 631 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC011476.1-201ENST00000466725 307 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC104109.1-201ENST00000498563 436 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 RNU6-699P-201ENST00000517081 110 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AP006245.2-201ENST00000522004 300 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC022884.2-201ENST00000578535 580 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 MIR5583-1-201ENST00000580941 59 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 MIR4512-201ENST00000583257 77 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AL355812.1-201ENST00000603215 216 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC006329.2-201ENST00000611491 394 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AL596275.2-204ENST00000641628 552 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AL596275.2-206ENST00000641957 626 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 LINC01355-201ENST00000566551 5444 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AL442639.1-201ENST00000625030 1899 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AP000542.2-201ENST00000623199 6179 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 AC009951.1-201ENST00000623674 2614 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 SMG1P6-201ENST00000532337 2930 ntBASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM42Q8IWZ5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AL592182.3-201ENST00000642132 3304 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC244517.1-201ENST00000606030 2086 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 OR52B3P-201ENST00000314715 928 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RNU6-179P-201ENST00000363350 107 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RNU6-472P-201ENST00000384299 107 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 Y_RNA.493-201ENST00000384422 102 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 EIF4E2P1-201ENST00000393781 255 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 MTCO2P33-201ENST00000402100 465 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RNU4-25P-201ENST00000410569 230 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RNU6-516P-201ENST00000411381 104 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC068533.1-201ENST00000418542 415 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 PDSS1P1-201ENST00000422953 1114 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RPL35AP22-201ENST00000436855 335 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RPL7P28-201ENST00000437739 740 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AP006222.1-205ENST00000450734 457 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RPL36AP13-201ENST00000457490 317 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 SNORD46.2-201ENST00000516021 102 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 RNU6-1016P-201ENST00000516689 94 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 IGKV2D-36-201ENST00000518643 226 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC022790.1-201ENST00000522872 204 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AP000648.1-201ENST00000529682 397 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 AC008521.2-201ENST00000591021 259 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 DDX18P3-201ENST00000404856 2007 ntBASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM42Q8IWZ5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM42Q8IWZ5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRIM42Q8IWZ5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM42Q8IWZ5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TRIM42Q8IWZ5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRIM42Q8IWZ5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM42Q8IWZ5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms