Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SNORA38.1-201ENST00000364172 131 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SNRPEP2-201ENST00000397592 279 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AL450338.1-201ENST00000407987 512 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 RN7SKP220-201ENST00000410611 288 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AL389915.1-201ENST00000422463 466 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 PSMA6P3-201ENST00000428242 164 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 RPL27AP5-201ENST00000469428 449 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 RPS3AP43-201ENST00000479743 781 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SNORA19.3-201ENST00000516165 130 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 RNU6-1028P-201ENST00000517164 93 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC090079.2-201ENST00000575289 768 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 FAM60BP-201ENST00000578364 658 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 COX6CP3-201ENST00000580869 223 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SNORD84-203ENST00000584275 78 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AP001029.3-201ENST00000588063 596 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 BNIP3P11-201ENST00000603878 563 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 MIR92B-201ENST00000607575 96 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC090897.3-201ENST00000636973 1157 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 U6.101-201ENST00000637707 76 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 AC092435.3-201ENST00000565538 3654 ntBASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC50Q8IVM0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 Y_RNA.408-201ENST00000383987 102 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 RNU6-298P-201ENST00000390888 96 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 Y_RNA.578-201ENST00000390903 88 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 PTP4A1P7-201ENST00000423476 514 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 DPRXP1-201ENST00000426312 460 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AL645638.1-201ENST00000440519 361 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC090525.1-201ENST00000479116 478 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 CAB39P1-201ENST00000502277 460 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 CBX3P3-201ENST00000508108 532 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC010460.2-201ENST00000509054 677 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 RNU6-1261P-201ENST00000517194 104 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AP001189.2-201ENST00000527320 189 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 DEFB130C-202ENST00000530001 230 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AC009237.15-201ENST00000610252 501 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AL158163.2-201ENST00000619110 700 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 AP003476.1-201ENST00000623984 516 ntBASIC3.03□□□□□ -1.92
CCDC50Q8IVM0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AP005901.5-201ENST00000545779 1796 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 ANKRD36P1-201ENST00000344424 659 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 RNA5SP374-201ENST00000362939 125 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 MIR512-1-201ENST00000384913 84 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 MIR592-201ENST00000384959 97 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 MIR34B-201ENST00000385076 84 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 MTCO1P56-201ENST00000401674 224 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 RNU2-47P-201ENST00000410649 186 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 RNU2-42P-201ENST00000410697 113 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AL161449.1-201ENST00000414531 1199 ntBASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC50Q8IVM0 AC104978.1-201ENST00000449387 391 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms