Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC006006.1-201ENST00000603082 144 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC006363.1-201ENST00000603806 463 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AL132822.1-201ENST00000617063 513 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 7SK.10-201ENST00000621414 298 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AP001350.1-201ENST00000601906 1524 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 RNU6-82P-201ENST00000363970 107 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 RNU6-550P-201ENST00000391057 101 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 RN7SKP100-201ENST00000411258 284 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC093414.1-201ENST00000434712 514 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.631-201ENST00000459607 101 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC004801.2-202ENST00000463559 283 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 MTND4P17-201ENST00000470444 350 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC027575.1-201ENST00000481064 460 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC090096.1-201ENST00000489168 390 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.665-201ENST00000516177 98 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.691-201ENST00000516611 103 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC021646.1-201ENST00000605469 484 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC103710.3-201ENST00000608157 948 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AL713922.2-201ENST00000619384 716 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC073869.10-201ENST00000642016 354 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 AC099654.2-201ENST00000433031 1980 ntBASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
NPAS4Q8IUM7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RNA5SP191-201ENST00000362585 102 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 SNORA2.3-201ENST00000383920 135 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RNU6-817P-201ENST00000391083 104 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RPL5P18-201ENST00000406671 891 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 SNORA77-201ENST00000408716 125 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 EI24P1-201ENST00000416584 867 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AL451054.2-201ENST00000420896 202 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 Z82205.1-201ENST00000428456 297 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RPL21P112-201ENST00000434403 463 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 GTF2IP13-201ENST00000438487 386 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 SDAD1P2-201ENST00000441308 2028 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RNU6-1208P-201ENST00000459588 107 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AL163540.1-201ENST00000485382 386 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC098591.2-201ENST00000510152 315 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RNU6-685P-201ENST00000517088 95 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC209154.1-201ENST00000582156 337 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 MIR6133-201ENST00000617057 108 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 MIR6839-201ENST00000620425 113 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AL353748.2-201ENST00000622148 471 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 AC066616.2-201ENST00000559334 1481 ntBASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPAS4Q8IUM7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms