Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RPL21P23-201ENST00000446654 460 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC073387.1-201ENST00000453261 709 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC012181.1-201ENST00000479895 423 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 PCBP2P3-201ENST00000509726 843 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL359273.1-201ENST00000510918 627 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC034159.1-201ENST00000513885 583 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 FAM60DP-201ENST00000524174 632 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC034268.2-201ENST00000571784 482 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 MIR3922-201ENST00000585192 84 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC020914.6-201ENST00000594327 272 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL109653.1-201ENST00000603091 248 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC034229.4-201ENST00000607861 441 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL450472.3-201ENST00000615578 367 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC068831.7-201ENST00000616954 363 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL357559.1-201ENST00000622228 274 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL732618.1-201ENST00000623251 301 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL356596.1-201ENST00000624230 379 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC092447.10-201ENST00000620607 1652 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 DEFB108F-201ENST00000344638 222 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 RNU6-853P-201ENST00000364306 107 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 RNU6-723P-201ENST00000383973 107 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 MIR183-201ENST00000384958 110 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL136116.1-201ENST00000403591 381 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 FAT1P1-201ENST00000406588 507 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 MTCO1P17-201ENST00000411522 491 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 PIGPP2-201ENST00000411569 458 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL022400.1-201ENST00000423946 935 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 RPL27AP8-201ENST00000424277 446 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 MTATP6P4-201ENST00000427725 675 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL035407.1-201ENST00000429211 571 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC073063.1-201ENST00000434352 607 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 HMGN2P20-201ENST00000437531 273 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL117351.1-201ENST00000438864 766 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC112653.1-201ENST00000443851 386 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC007967.1-201ENST00000455422 1159 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 SNORD121B-201ENST00000458838 81 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC147055.4-201ENST00000504399 745 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 SNORA3.4-201ENST00000515969 96 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AP006245.1-201ENST00000522549 120 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 DEFB108D-201ENST00000527787 222 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC125611.2-201ENST00000551907 647 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ELOCP35-201ENST00000604289 336 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC007179.3-201ENST00000604976 235 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC002076.2-201ENST00000617362 122 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 AC007490.1-201ENST00000624321 703 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ZNF807-201ENST00000328088 1707 ntBASIC3.67□□□□□ -1.82
PRPF39Q86UA1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 RPL21P132-201ENST00000331267 462 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 RNU5A-1-201ENST00000362698 116 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms