Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.539-201ENST00000384635 107 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RNU6-278P-201ENST00000390945 109 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AL136372.1-201ENST00000403060 228 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AL445189.1-201ENST00000405722 338 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC022022.1-201ENST00000430304 178 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 GAPDHP58-201ENST00000438477 1006 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 PTMAP6-201ENST00000439110 327 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AL139109.1-201ENST00000455491 297 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RN7SL189P-201ENST00000468631 289 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC090602.1-201ENST00000469695 252 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 OR2AO1P-201ENST00000476497 403 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC093270.2-201ENST00000486157 792 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RN7SL808P-201ENST00000496066 299 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC072052.1-201ENST00000496556 306 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 SNORA25.11-201ENST00000515935 105 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RNU6-397P-201ENST00000516226 104 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AL049839.1-201ENST00000556151 657 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC010900.2-201ENST00000604508 210 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 MIR6837-201ENST00000620884 64 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 CYP3A51P-201ENST00000633513 256 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC055839.1-201ENST00000634467 498 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 MIR4272-201ENST00000635924 64 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC107081.3-201ENST00000612715 2034 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AL138713.1-201ENST00000624026 2130 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RNA5SP183-201ENST00000362452 119 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RN7SKP95-201ENST00000362860 303 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.276-201ENST00000364732 109 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RNU1-74P-201ENST00000384108 171 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RNU6-125P-201ENST00000384505 107 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 SAR1AP2-201ENST00000392696 594 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 PCNPP3-201ENST00000393579 471 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AL139148.1-201ENST00000427122 680 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC093106.2-201ENST00000428212 385 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RPS3AP12-201ENST00000443616 753 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RBMY2TP-201ENST00000451162 947 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC005229.2-201ENST00000456995 399 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC108161.1-201ENST00000461060 402 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RPL21P8-201ENST00000465083 535 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 CEACAMP10-202ENST00000495431 496 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC006499.3-201ENST00000506077 748 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RNA5SP230-201ENST00000517039 122 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 FAM60DP-201ENST00000524174 632 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC090115.3-201ENST00000553218 849 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC044860.2-201ENST00000561005 179 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC106782.4-201ENST00000568264 210 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC090615.1-201ENST00000577519 154 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 HMGB2P1-201ENST00000591146 634 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 RNU6-84P-201ENST00000607737 102 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC211433.2-201ENST00000608433 387 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC092747.4-201ENST00000620519 1861 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AC127459.3-201ENST00000624328 466 ntBASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms