Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 PANDAR-201ENST00000629595 1506 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC011978.2-201ENST00000569835 2054 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 Y_RNA.64-201ENST00000362845 102 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 Y_RNA.150-201ENST00000363562 102 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RNA5SP240-201ENST00000365355 128 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 SNORA67-201ENST00000384423 137 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 U3.36-201ENST00000408418 213 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC079809.1-201ENST00000415468 276 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC108032.1-201ENST00000416706 207 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 ELOCP20-201ENST00000422460 345 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RPL7P2-201ENST00000427639 268 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AL645568.3-201ENST00000433683 316 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC127537.2-201ENST00000439258 465 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RPL7P5-201ENST00000471472 736 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AP000926.1-201ENST00000479573 241 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RN7SL447P-201ENST00000494711 245 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 MTCO3P44-201ENST00000510977 541 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-941P-201ENST00000516346 108 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-347P-201ENST00000516658 105 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 RN7SKP92-201ENST00000517266 244 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 MIR3934-201ENST00000579806 107 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AP000769.2-201ENST00000602344 396 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AC025588.3-201ENST00000604182 274 ntBASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.15□□□□□ -1.42
SH3RF1Q7Z6J0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SH3RF1Q7Z6J0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SH3RF1Q7Z6J0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SH3RF1Q7Z6J0 AL606537.1-201ENST00000607258 2011 ntBASIC6.15□□□□□ -1.43
SH3RF1Q7Z6J0 AC144833.1-201ENST00000567953 4089 ntBASIC6.15□□□□□ -1.43
SH3RF1Q7Z6J0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AL137003.2-201ENST00000606924 2538 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.19-201ENST00000362462 99 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 RNVU1-3-201ENST00000364313 161 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.270-201ENST00000364693 104 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 RNU6-842P-201ENST00000384269 107 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 SNORA5.1-201ENST00000384275 131 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.577-201ENST00000384794 101 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 RPL21P24-201ENST00000413752 448 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 UBE2V1P4-201ENST00000425374 344 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 SETP5-201ENST00000437270 562 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AL354710.1-201ENST00000453641 246 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 SETP7-201ENST00000552169 453 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC127381.1-201ENST00000555979 939 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC084783.1-201ENST00000565846 910 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 MIR4697-201ENST00000582977 78 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC005191.1-201ENST00000603950 358 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 HMGB1P50-201ENST00000605814 607 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC074140.1-201ENST00000621617 208 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 uc_338.7-201ENST00000621834 124 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 AC097461.1-201ENST00000568928 2821 ntBASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SH3RF1Q7Z6J0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.13□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.126-201ENST00000363382 111 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms