Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 TRBV8-2-201ENST00000475637 270 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.66□□□□□ -1.82
USP43Q70EL4 RPL7P42-201ENST00000481005 679 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC105137.1-201ENST00000484355 562 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.66□□□□□ -1.82
USP43Q70EL4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.66□□□□□ -1.82
USP43Q70EL4 RNA5SP135-201ENST00000517019 125 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.66□□□□□ -1.82
USP43Q70EL4 POLR2KP1-201ENST00000553226 168 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC025884.1-201ENST00000556034 378 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AL157394.1-201ENST00000562983 1224 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC012182.1-201ENST00000570133 895 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 MIR548AB-201ENST00000584917 84 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC008277.2-201ENST00000605196 797 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC008536.2-201ENST00000607284 349 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AL050343.2-201ENST00000607338 280 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC124864.2-201ENST00000624736 186 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC008013.2-202ENST00000637965 364 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 MKKS-204ENST00000639674 192 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.66□□□□□ -1.82
USP43Q70EL4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.66□□□□□ -1.82
USP43Q70EL4 RNF6P1-201ENST00000444889 1784 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP43Q70EL4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
USP43Q70EL4 Y_RNA.372-201ENST00000365599 102 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 SUGT1P1-201ENST00000379514 476 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 Y_RNA.529-201ENST00000384586 119 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 RNU6-297P-201ENST00000384636 107 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 MIR124-3-201ENST00000384866 87 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 PTMAP5-201ENST00000393073 333 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC025750.1-201ENST00000399891 379 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 MIR1302-11-201ENST00000408051 138 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 MIR1302-9-201ENST00000408365 138 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 MIR1302-10-201ENST00000408734 138 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 TMSB10P2-201ENST00000416049 131 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AC005534.2-201ENST00000431047 433 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 RPL22P17-201ENST00000438729 315 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 USP9YP15-201ENST00000442391 422 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 RPL23AP12-201ENST00000467573 473 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 RN7SL271P-201ENST00000487601 295 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC012170.1-201ENST00000495139 359 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 SETP14-201ENST00000497538 873 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AL035404.1-201ENST00000497982 568 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.65□□□□□ -1.83
USP43Q70EL4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AP003072.1-201ENST00000531740 145 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 CYCSP29-201ENST00000533731 318 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AK6P1-201ENST00000540219 478 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC008127.2-201ENST00000549925 1075 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AC106785.1-201ENST00000565935 262 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC007151.1-201ENST00000572774 483 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 RPS3AP23-202ENST00000574601 686 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC010928.3-201ENST00000587712 541 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AC005255.1-201ENST00000593748 216 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AL354984.3-201ENST00000604803 325 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.65□□□□□ -1.83
USP43Q70EL4 MIR1302-2-201ENST00000607096 138 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 MIR92B-201ENST00000607575 96 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP43Q70EL4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
USP43Q70EL4 AP002001.2-201ENST00000529025 1469 ntBASIC3.65□□□□□ -1.83
USP43Q70EL4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.65□□□□□ -1.83
USP43Q70EL4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
USP43Q70EL4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 RNU5A-6P-201ENST00000384136 116 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 RPL23AP29-201ENST00000397284 453 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AL022722.2-201ENST00000402519 180 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 RPL23AP47-201ENST00000408017 460 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 MIR1303-201ENST00000408625 86 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 RNU6-248P-201ENST00000410720 107 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms