Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 Z99497.1-201ENST00000421282 135 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC002075.2-201ENST00000425207 252 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 MTND4P32-201ENST00000437189 1237 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC104563.1-201ENST00000476147 376 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC068305.1-201ENST00000497406 726 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 OR2A20P-203ENST00000498397 1268 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 HSPD1P15-201ENST00000505573 1122 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC026427.2-201ENST00000506228 536 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 POU5F1P7-201ENST00000508759 541 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 OR5AP1P-201ENST00000529730 940 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AP004247.1-201ENST00000531556 1289 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 IGHV3-29-201ENST00000604817 344 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC092354.1-201ENST00000606057 376 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC080013.6-201ENST00000606185 215 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AL713922.2-201ENST00000619384 716 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 AL732618.1-201ENST00000623251 301 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP41Q3LFD5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
USP41Q3LFD5 PABPC1P9-201ENST00000426076 1612 ntBASIC3.84□□□□□ -1.8
USP41Q3LFD5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
USP41Q3LFD5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP41Q3LFD5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP41Q3LFD5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP41Q3LFD5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 RNU6-501P-201ENST00000364072 100 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 SNORD116-9-201ENST00000384000 95 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 SNORD116-3-201ENST00000384287 95 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 SNORD116-7-201ENST00000384404 95 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 SNORD116-5-201ENST00000384462 95 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC109780.2-201ENST00000413467 845 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC129850.1-201ENST00000436203 508 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 SKP1P1-201ENST00000438081 489 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL512286.1-201ENST00000439244 400 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC009961.3-201ENST00000449832 765 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 HMGB3P30-201ENST00000457863 606 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 RPL31P3-201ENST00000458430 332 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 RPL21P10-201ENST00000463521 490 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AP000873.1-201ENST00000463987 400 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 RN7SL601P-201ENST00000471221 293 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL024509.2-201ENST00000493462 493 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC106872.3-201ENST00000495104 446 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 COX7A2P2-201ENST00000505291 250 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC093677.1-201ENST00000514414 678 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 SNORA74D-201ENST00000516404 141 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 SNORA70.18-201ENST00000516696 98 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC068587.4-201ENST00000533893 186 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC023161.2-201ENST00000551218 780 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 NCAPGP2-201ENST00000557911 754 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 PCMTD1P2-201ENST00000565017 355 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC090615.1-201ENST00000577519 154 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL031775.1-201ENST00000607014 887 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 AL442067.2-201ENST00000614033 363 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
USP41Q3LFD5 AC018755.4-201ENST00000619715 454 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.83□□□□□ -1.8
USP41Q3LFD5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms