Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 HMGN2P28-201ENST00000606102 262 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC092159.4-201ENST00000624944 550 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA4P78363 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 RN7SKP226-201ENST00000364912 300 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 LUZP4P1-201ENST00000415420 344 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.81□□□□□ -2.12
ABCA4P78363 AC114982.2-201ENST00000461396 358 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.81□□□□□ -2.12
ABCA4P78363 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.81□□□□□ -2.12
ABCA4P78363 AC108078.2-201ENST00000510750 236 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 RNA5SP200-201ENST00000516360 103 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.81□□□□□ -2.12
ABCA4P78363 AMZ2P1-203ENST00000565833 850 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 AL391834.1-201ENST00000609609 560 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ABCA4P78363 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 AL136520.1-201ENST00000600311 1322 ntBASIC1.81□□□□□ -2.12
ABCA4P78363 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ABCA4P78363 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ABCA4P78363 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.8□□□□□ -2.12
ABCA4P78363 FGF7P8-201ENST00000402994 292 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 RNU6-233P-201ENST00000410845 141 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCA4P78363 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.8□□□□□ -2.12
ABCA4P78363 AC239860.2-201ENST00000525886 270 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
ABCA4P78363 AC012182.1-201ENST00000570133 895 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 MIR3690-201ENST00000580266 75 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AL645944.1-201ENST00000603857 493 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AL391813.2-201ENST00000609113 322 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.15-201ENST00000611544 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.16-201ENST00000613119 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.12-201ENST00000613778 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.20-201ENST00000613956 192 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.9-201ENST00000615427 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.11-201ENST00000616345 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.2-201ENST00000616535 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.3-201ENST00000617785 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.19-201ENST00000618602 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 RNU2-1-201ENST00000618664 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.6-201ENST00000619225 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.5-201ENST00000619465 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 U2.10-201ENST00000620268 191 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AP001350.1-201ENST00000601906 1524 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ABCA4P78363 AC092427.1-202ENST00000430569 476 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AL445646.1-201ENST00000431784 216 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 RPS26P30-201ENST00000443431 335 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCA4P78363 AC004263.1-201ENST00000479327 332 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 TTC39CP1-201ENST00000512513 755 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AP000889.2-201ENST00000532684 490 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.8□□□□□ -2.12
ABCA4P78363 AC025281.1-201ENST00000567026 265 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 MTCO3P24-201ENST00000572729 782 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 AC073348.1-201ENST00000623002 331 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.8□□□□□ -2.12
ABCA4P78363 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
ABCA4P78363 MTND5P7-201ENST00000413558 1798 ntBASIC1.8□□□□□ -2.12
ABCA4P78363 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
ABCA4P78363 RNU6-457P-201ENST00000363999 107 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 SNORD56.5-201ENST00000364281 72 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 MTCYBP12-201ENST00000440559 1134 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC093392.2-201ENST00000450682 337 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 RPL30P11-201ENST00000495304 339 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AP003717.3-201ENST00000544832 1180 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCA4P78363 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCA4P78363 AL627309.6-201ENST00000606857 840 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ABCA4P78363 AC092650.2-201ENST00000619984 902 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 OR1S1-201ENST00000624470 978 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC090897.3-201ENST00000636973 1157 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.79□□□□□ -2.12
ABCA4P78363 RNU6-317P-201ENST00000384031 107 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 SNORA67.5-201ENST00000391036 107 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC240504.1-201ENST00000395709 845 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 DNAJC19P6-201ENST00000401853 280 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 RNA5SP344-201ENST00000411081 104 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 HMGB1P11-201ENST00000413899 637 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC011753.1-201ENST00000451001 220 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 RPL7P5-201ENST00000471472 736 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC017007.3-201ENST00000479865 435 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.79□□□□□ -2.12
ABCA4P78363 MTCO2P32-201ENST00000514865 403 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms